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Mapping Data
Experiment
  • Experiment
    TEXT-Physical Mapping
  • Chromosome
    13
  • Reference
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • ID
    MGI:2449330
Genes
GeneAlleleAssay TypeDescription
Acot13 assembly
Ercc6l2 assembly
Hist1h1c assembly
Tmem174 assembly
Ccdc127 assembly
Sirt5 assembly
Srd5a1 assembly
Stard3nl assembly
0610040A22Rik assembly
Tmem167 assembly
Pdlim7 assembly
Lman2 assembly
Bicd2 assembly
Arsb assembly
Card19 assembly
Actn2 assembly
Prxl2c assembly
Tmem14c assembly
Dusp22 assembly
Lysmd3 assembly
Fam172a assembly
Carmil1 assembly
Rreb1 assembly
Cks2 assembly
1110046J04Rik assembly
Snrnp48 assembly
Smad5 assembly
Hnrnpa0 assembly
Fbxw17 assembly
Fam240b assembly
Cdkal1 assembly
Ptcd2 assembly
Ctsl assembly
Dmgdh assembly
Poc5 assembly
Acot12 assembly
Lman2 assembly
Pxdc1 assembly
Ssbp2 assembly
1500032O14Rik assembly
Cts3 assembly
Serpinb9g assembly
Yae1d1 assembly
Prl7b1 assembly
Prl3a1 assembly
Prl8a1 assembly
Serpinb9b assembly
Ppp1r3g assembly
1700001L19Rik assembly
1700084F23Rik assembly
1700003P14Rik assembly
1700006H21Rik assembly
1700011B04Rik assembly
1700012J22Rik assembly
Spata31d1a assembly
Pou5f2 assembly
1700014D04Rik assembly
1700015C15Rik assembly
Armh2 assembly
1700016G22Rik assembly
Susd3 assembly
1700018A04Rik assembly
1700019C18Rik assembly
Ercc6l2 assembly
Gpx6 assembly
Agtpbp1 assembly
Cenpp assembly
1700024I08Rik assembly
1700024P04Rik assembly
Gm2762 assembly
Zfp169 assembly
1700025O18Rik assembly
Fam217a assembly
1700026N04Rik assembly
Spz1 assembly
1700029F12Rik assembly
1700029N11Rik assembly
Spata9 assembly
1700003P14Rik assembly
Gpbp1 assembly
1700037F03Rik assembly
1700042D18Rik assembly
4932702P03Rik assembly
Btf3 assembly
1700058M13Rik assembly
1700061E18Rik assembly
1700066J03Rik assembly
1700072F12Rik assembly
Ipo11 assembly
1700084D21Rik assembly
1700084F23Rik assembly
1700092E19Rik assembly
1700099I09Rik assembly
1700100L14Rik assembly
Ripor2 assembly
1700112M02Rik assembly
1700119I11Rik assembly
1700125C05Rik assembly
1700129O19Rik assembly
Isca1 assembly
Akr1c19 assembly
Zcchc9 assembly
Dek assembly
Eci3 assembly
Ggps1 assembly
Ubqln1 assembly
Edaradd assembly
1810034E14Rik assembly
Ippk assembly
Ndufaf2 assembly
Wnk2 assembly
Bloc1s5 assembly
Agtr1a assembly
2010001K21Rik assembly
Aggf1 assembly
Bphl assembly
Higd2a assembly
Aopep assembly
2010203P06Rik assembly
Ddx46 assembly
Nol7 assembly
Asb13 assembly
2210016F16Rik assembly
4833420G17Rik assembly
Tspan17 assembly
Zfp87 assembly
Zmynd11 assembly
Faf2 assembly
2210408I21Rik assembly
2210416J07Rik assembly
Aopep assembly
Agtpbp1 assembly
Golm1 assembly
2310005E17Rik assembly
Fastkd3 assembly
Gpx8 assembly
2310020H05Rik assembly
Aggf1 assembly
2310045N14Rik assembly
Prl2b1 assembly
Polr3g assembly
Txndc15 assembly
Psmg4 assembly
Ctsll3 assembly
2310057B04Rik assembly
2310067P03Rik assembly
Calml3 assembly
Cmya5 assembly
Cmya5 assembly
Tmed9 assembly
Pdlim7 assembly
Trappc13 assembly
Mterf3 assembly
Exoc2 assembly
Thoc3 assembly
Ipo11 assembly
Iars assembly
Zbed3 assembly
Tbc1d7 assembly
Zfp748 assembly
Mrps27 assembly
Cep72 assembly
Rhobtb3 assembly
2610204G07Rik assembly
2610304O13Rik assembly
2610307P16Rik assembly
2610312I10Rik assembly
Fam172a assembly
Prelid1 assembly
Mtrex assembly
Slf1 assembly
Pcbd2 assembly
Smim15 assembly
Secisbp2 assembly
Mplkip assembly
2810049E08Rik assembly
Exoc3 assembly
2810403G07Rik assembly
2810411K19Rik assembly
Dapk1 assembly
2810429I04Rik assembly
Arsk assembly
Fars2 assembly
Ercc8 assembly
Cdc14b assembly
Susd3 assembly
Tmem161b assembly
C130071C03Rik assembly
Cap2 assembly
Mctp1 assembly
Zfp429 assembly
2900011L18Rik assembly
Atxn1 assembly
2900024D18Rik assembly
Ddx41 assembly
Mblac2 assembly
Dip2c assembly
Zswim6 assembly
Smim13 assembly
Tppp assembly
2900042G08Rik assembly
Diras2 assembly
Zfp493 assembly
Agtpbp1 assembly
2900064B16Rik assembly
2900079J23Rik assembly
Hnrnpa0 assembly
3021401N23Rik assembly
Rnf180 assembly
Slc22a23 assembly
Ube2ql1 assembly
3110006O06Rik assembly
3110015C05Rik assembly
Srek1ip1 assembly
Wdr37 assembly
Riok1 assembly
Prl8a1 assembly
3830408C21Rik assembly
Uqcrfs1 assembly
4432414F05Rik assembly
Ercc8 assembly
Zfp87 assembly
4631422I05Rik assembly
Slc6a19 assembly
Ppwd1 assembly
Simc1 assembly
Actbl2 assembly
4732499D12Rik assembly
Idi1 assembly
Idi2 assembly
4833406M21Rik assembly
Slc38a9 assembly
Arsk assembly
4833420G17Rik assembly
Nkapl assembly
Zfp712 assembly
Pgbd1 assembly
4921509O07Rik assembly
Taf9 assembly
4921517D22Rik assembly
Cenpp assembly
4921520N01Rik assembly
Catsper3 assembly
4921525O09Rik assembly
Slc35b3 assembly
Nol8 assembly
4922502H24Rik assembly
4930401O12Rik assembly
Fam151b assembly
4930415C11Rik assembly
Mast4 assembly
Nnt assembly
Zfp169 assembly
Aoah assembly
Srd5a1 assembly
4930435F18Rik assembly
Zfp85os assembly
Agtpbp1 assembly
4930447K03Rik assembly
4930448F12Rik assembly
4930448O17Rik assembly
Acot12 assembly
4930451E10Rik assembly
D130043K22Rik assembly
4930453C13Rik assembly
4930455J16Rik assembly
4930455M05Rik assembly
Spata31 assembly
4930467J12Rik assembly
4930470G03Rik assembly
Mtx3 assembly
4930471G24Rik assembly
Nln assembly
Serpinb6a assembly
4930483C01Rik assembly
4930486L24Rik assembly
Zfp184 assembly
Kif13a assembly
4930511O05Rik assembly
Kif27 assembly
4930519D14Rik assembly
Nxnl2 assembly
4930520P13Rik assembly
4930521G14Rik assembly
4930525G20Rik assembly
4930526F13Rik assembly
4930526H09Rik assembly
Sv2c assembly
4930528D03Rik assembly
4930529N20Rik assembly
Rnaset2a assembly
4930544M13Rik assembly
4930547H16Rik assembly
4930548F15Rik assembly
4930550C17Rik assembly
1700018A04Rik assembly
Mccc2 assembly
4930555G21Rik assembly
4930555K05Rik assembly
4930557F10Rik assembly
4833439L19Rik assembly
4930562M23Rik assembly
4930563N14Rik assembly
4930579J19Rik assembly
1700003P14Rik assembly
4930586N03Rik assembly
1700084F23Rik assembly
4930597G05Rik assembly
Spata9 assembly
4931429P17Rik assembly
Rmi1 assembly
4933404K08Rik assembly
4933404M09Rik assembly
4933412O06Rik assembly
4933413L06Rik assembly
4933416M06Rik assembly
4933416O17Rik assembly
Wdr37 assembly
4933417A18Rik assembly
Iqgap2 assembly
Zdhhc11 assembly
4933425L06Rik assembly
Cage1 assembly
4933427I18Rik assembly
4933433G19Rik assembly
4933436N17Rik assembly
1700018A04Rik assembly
Cep72 assembly
4933440K10Rik assembly
5033403F01Rik assembly
Sugct assembly
5033430I15Rik assembly
Il6st assembly
Idnk assembly
5330429C05Rik assembly
Gcnt2 assembly
5330431K02Rik assembly
Mef2c assembly
Riok1 assembly
Ccdc127 assembly
Vcan assembly
Slc6a19os assembly
5430425K12Rik assembly
5530402G07Rik assembly
Agtpbp1 assembly
Slc35d2 assembly
Nol8 assembly
Mfsd14b assembly
Tmem167 assembly
Bphl assembly
4833420G17Rik assembly
Gm11346 assembly
5830433M15Rik assembly
Ccdc125 assembly
Fgd3 assembly
Edaradd assembly
Pak1ip1 assembly
5930430O07Rik assembly
Mcur1 assembly
6230424C14Rik assembly
Aldh5a1 assembly
Rasgrf2 assembly
Arid4b assembly
6330437I11Rik assembly
Ripor2 assembly
Trim23 assembly
Rbm24 assembly
6330563C09Rik assembly
Elmo1 assembly
Ankrd34b assembly
6430562O15Rik assembly
Snrnp48 assembly
Rab24 assembly
Stard3nl assembly
Gfm2 assembly
Cdkal1 assembly
Ndufs4 assembly
Slc38a9 assembly
6720427H10Rik assembly
6720427I07Rik assembly
6720470G18Rik assembly
Fars2 assembly
Arid4b assembly
Zfp738 assembly
Klhl3 assembly
8030423J24Rik assembly
8030448K23Rik assembly
BC005537 assembly
Zfp367 assembly
8430406P12Rik assembly
Dhfr assembly
Ddx46 assembly
Ecm2 assembly
Elovl7 assembly
Slc38a9 assembly
Slc17a4 assembly
Mboat1 assembly
9130219B18Rik assembly
9130221L21Rik assembly
Col4a3bp assembly
Arhgef28 assembly
9330111N05Rik assembly
Hecw1 assembly
Ryr2 assembly
Ankdd1b assembly
9330159N22Rik assembly
Ssbp2 assembly
9330199G10Rik assembly
Uimc1 assembly
Akr1c21 assembly
Rad17 assembly
Fam172a assembly
Mylip assembly
9430065F17Rik assembly
Slc38a9 assembly
9430081G06Rik assembly
9430081I23Rik assembly
9430083A17Rik assembly
9530001D17Rik assembly
9530001P21Rik assembly
Adtrp assembly
9530014B07Rik assembly
9530027D23Rik assembly
9530083O12Rik assembly
Ggps1 assembly
Pde4d assembly
Phactr1 assembly
Zfp322a assembly
Mef2c assembly
9930031P18Rik assembly
9930104M19Rik assembly
A130022D17Rik assembly
A130026F07Rik assembly
Serinc5 assembly
A130049L09Rik assembly
A130082J08Rik assembly
A130095M15Rik assembly
A230056J06Rik assembly
A230102O21Rik assembly
A230103O09Rik assembly
Ptch1 assembly
A230107N01Rik assembly
Naa35 assembly
Naa35 assembly
A330033J07Rik assembly
A330048O09Rik assembly
A330076C08Rik assembly
Ppwd1 assembly
A330102I10Rik assembly
A430062P19Rik assembly
A430063P04Rik assembly
A430090L17Rik assembly
A430105P17Rik assembly
A430106F12Rik assembly
Cdc14b assembly
Gpr141b assembly
A630036H22Rik assembly
A730009E18Rik assembly
A730081D07Rik assembly
A730087J23Rik assembly
A730091E23Rik assembly
Ssbp2 assembly
A830009L08Rik assembly
A830082K12Rik assembly
A930002C04Rik assembly
Gfm2 assembly
Mak assembly
A930014D07Rik assembly
A930015P04Rik assembly
Sfxn1 assembly
A930018O16Rik assembly
Adamts6 assembly
Shisal2b assembly
Spata9 assembly
A930025H08Rik assembly
A930032L01Rik assembly
A930041H05Rik assembly
A930104B17Rik assembly
B3galnt2 assembly
Dsp assembly
Tut7 assembly
Abt1 assembly
Adarb2 assembly
Zfyve16 assembly
Elmo1 assembly
Ripor2 assembly
Iars assembly
Lhfpl2 assembly
Srek1 assembly
D130076G13Rik assembly
Kdm1b assembly
Nhlrc1 assembly
Tcrg-V4 assembly
Tent2 assembly
Gli3 assembly
Slc9a3 assembly
Akr1c12 assembly
Akr1e1 assembly
Ankra2 assembly
Aoah assembly
Atg10 assembly
Erap1 assembly
Aspn assembly
D930043N17Rik assembly
Cdk20 assembly
E030046B03Rik assembly
Dhx29 assembly
Auh assembly
Bdp1 assembly
Golm1 assembly
Slf1 assembly
Akr1c14 assembly
Nup153 assembly
Heatr1 assembly
Cenpk assembly
Ercc8 assembly
Fam169a assembly
B230207M22Rik assembly
B230219D22Rik assembly
B230220B15Rik assembly
Pde8b assembly
B330018G23Rik assembly
Wdr41 assembly
Rreb1 assembly
Zfp369 assembly
B930063P07Rik assembly
9330199F22Rik assembly
Lysmd3 assembly
Tasor2 assembly
Bhmt assembly
Bicd2 assembly
Btf3 assembly
Gpr150 assembly
Naa35 assembly
C030005H24Rik assembly
C030010C08Rik assembly
Ankrd55 assembly
C030014A21Rik assembly
C030017D09Rik assembly
Ntrk2 assembly
Drd1 assembly
C030039E19Rik assembly
Fam120aos assembly
Pde8b assembly
C130051F05Rik assembly
Clptm1l assembly
C130063H03Rik assembly
C130071C03Rik assembly
Arl15 assembly
C230035I16Rik assembly
C330006P03Rik assembly
Mplkip assembly
C330026N13Rik assembly
C430039J16Rik assembly
Cenpk assembly
C530030B14Rik assembly
C530030K21Rik assembly
C530050E15Rik assembly
Sgtb assembly
Hcn1 assembly
C630044B11Rik assembly
Slc17a2 assembly
C130040J23Rik assembly
B430203I24Rik assembly
A530058O07Rik assembly
B3galnt2 assembly
Asb13 assembly
Nlrp4f assembly
Calm4 assembly
Cast assembly
Ccnh assembly
Cdk13 assembly
Cetn3 assembly
Ckmt2 assembly
Ercc8 assembly
Cltb assembly
Cmah assembly
Col4a3bp assembly
Cts7 assembly
Cts8 assembly
Cxcl14 assembly
Fam50b assembly
Pou6f2 assembly
D130012G24Rik assembly
D130062J10Rik assembly
Mier3 assembly
Zfp369 assembly
Gpbp1 assembly
D230040N21Rik assembly
Ripk1 assembly
Uimc1 assembly
D330041B21Rik assembly
Zkscan8 assembly
D530015H24Rik assembly
B230219D22Rik assembly
Slc6a18 assembly
Aldh5a1 assembly
Uimc1 assembly
Fbxl21 assembly
D730050B12Rik assembly
Dapk1 assembly
Dtnbp1 assembly
Itga1 assembly
E130101A01Rik assembly
Rnf144b assembly
9430065F17Rik assembly
E130112B07Rik assembly
E130119H09Rik assembly
Dhx29 assembly
Hecw1 assembly
Nedd9 assembly
Ipo11 assembly
Exoc3 assembly
S1pr3 assembly
Edil3 assembly
Eef1e1 assembly
Elovl2 assembly
Enc1 assembly
Erbin assembly
Esm1 assembly
Etohd2 assembly
F2rl2 assembly
F830002E08Rik assembly
Fbp1 assembly
Fst assembly
Ftl1 assembly
Bdp1 assembly
Gadd45g assembly
Gdi2 assembly
Gkap1 assembly
Gmpr assembly
Gtpbp4 assembly
H2afy assembly
Habp4 assembly
Hist1h1b assembly
Hist1h2bc assembly
Hist1h4h assembly
Hnrnpk assembly
Hspb3 assembly
Irf4 assembly
Isl1 assembly
Jmy assembly
Kif2a assembly
Cd180 assembly
Mocs2 assembly
Mrpl32 assembly
Mrps30 assembly
Ndufs4 assembly
Net1 assembly
Ninj1 assembly
Nkd2 assembly
Nqo2 assembly
Nrn1 assembly
Ogn assembly
Omd assembly
Pdcd6 assembly
Eci2 assembly
Pelo assembly
Pfkp assembly
Pitrm1 assembly
Prl7d1 assembly
Polk assembly
Prl8a9 assembly
Prl8a8 assembly
Prpf4b assembly
Psma2 assembly
Ptdss1 assembly
Rab3c assembly
Rhobtb3 assembly
Scamp1 assembly
Cwc27 assembly
Sdha assembly
Serpinb1a assembly
Serpinb1b assembly
Zkscan3 assembly
Slc12a7 assembly
Slc28a3 assembly
Slc30a5 assembly
Snx18 assembly
Serpinb9c assembly
Serpinb6b assembly
Serpinb9e assembly
Spock1 assembly
Sptlc1 assembly
Ssbp2 assembly
Ssr1 assembly
Taf9 assembly
Trip13 assembly
Nme8 assembly
Wrnip1 assembly
Xrcc4 assembly
Zkscan8 assembly
Zfp346 assembly
Zscan12 assembly
Mtr assembly
Gpr137b assembly
Chrm3 assembly
Lyst assembly
Nid1 assembly
Sfrp4 assembly
Tbce assembly
Ggps1 assembly
Gpx5 assembly
Lgals8 assembly
Vps41 assembly
Prss16 assembly
Rala assembly
Trim27 assembly
Btn1a1 assembly
Hist1h3f assembly
Tdp2 assembly
Gpld1 assembly
Prl3b1 assembly
Prl5a1 assembly
Prl assembly
Prl8a6 assembly
Prl7a2 assembly
Prl3c1 assembly
Hfe assembly
Serpinb6a assembly
Serpinb9 assembly
Cdyl assembly
Gcnt2 assembly
Dsp assembly
Bmp6 assembly
Sox4 assembly
Cd83 assembly
Tfap2a assembly
Edn1 assembly
Jarid2 assembly
Atxn1 assembly
Tpmt assembly
Ctsl assembly
Pfn3 assembly
Slc34a1 assembly
Spin1 assembly
Drd1 assembly
Hrh2 assembly
Mxd3 assembly
Rgs14 assembly
Fgfr4 assembly
Caml assembly
Nop16 assembly
Ror2 assembly
Ctsm assembly
Ctsq assembly
Ctsr assembly
Ubqln1 assembly
Grk6 assembly
Smad5 assembly
Sfxn1 assembly
Cts6 assembly
Ctsj assembly
Fancc assembly
Ntrk2 assembly
Tpbpa assembly
Tgfbi assembly
Nsun2 assembly
Adgrv1 assembly
Med10 assembly
Dhfr assembly
Irx2 assembly
Hapln1 assembly
Glrx assembly
Pcsk1 assembly
Mef2c assembly
Nr2f1 assembly
F2r assembly
Bhmt2 assembly
Arsb assembly
Pik3r1 assembly
Cenph assembly
Msh3 assembly
Map1b assembly
Pde4d assembly
Arhgef28 assembly
Serf1 assembly
Smn1 assembly
Vcan assembly
Gtf2h2 assembly
Ocln assembly
Rgs7bp assembly
Htr1a assembly
Itga2 assembly
Nnt assembly
Ddx4 assembly
Hcn1 assembly
Parp8 assembly
Fgf10 assembly
Notes
  • Reference
    The markers listed below for this experiment were mapped to mouse chromosomes based on sequence similarities to the Mouse Genome Sequencing Consortium (MGSC V3) assembly. Chromosomal locations were obtained from the Genome Exploration Research Group of the RIKEN Institute of Physical and Chemical Research in Japan. Where multiple RIKEN clones were associated to the same marker by sequence similarity clustering, mapping data were loaded only if all RIKEN clones from the same cluster mapped to the same mouse chromosome.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
06/18/2019
MGI 6.14
The Jackson Laboratory