2610204G07Rik Gene Detail

Summary

• Symbol
  2610204G07Rik
• Name
  RIKEN cDNA 2610204G07 gene

• Feature Type
  lncRNA gene
• IDs
  MGI:1919718
  NCBI Gene: 72468
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr13:104821383-104832334 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, 56.71 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  215 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1919718	lncRNA gene	Chr13:104821383-104832334 (+)
129S1/SvImJ	ENSMUSG00200009054	lncRNA gene	Chr13:99242208-99252271 (+)
A/J	ENSMUSG00195030748	lncRNA gene	Chr13:99835300-99845370 (+)
AKR/J	ENSMUSG00220029586	lncRNA gene	Chr13:98256433-98266503 (+)
BALB/cJ	ENSMUSG00180038553	lncRNA gene	Chr13:100389641-100399706 (+)
C3H/HeJ	ENSMUSG00175017867	lncRNA gene	Chr13:100471148-100481213 (+)
C57BL/6NJ	ENSMUSG00215032512	lncRNA gene	Chr13:100468834-100478897 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002846	antisense lncRNA gene	Chr13:98235023-98245339 (+)
CAST/EiJ	ENSTCUG00005011747	lncRNA gene	Chr13:99613343-99623422 (+)
CBA/J	ENSMUSG00210011925	lncRNA gene	Chr13:99792118-99802183 (+)
DBA/2J	ENSMUSG00185027752	lncRNA gene	Chr13:103545736-103555799 (+)
FVB/NJ	ENSMUSG00205038188	lncRNA gene	Chr13:99240767-99250835 (+)
JF1/MsJ	ENSUMUG00000013343	lncRNA gene	Chr13:103143630-103153699 (+)
LP/J	ENSMUSG00230008439	lncRNA gene	Chr13:113711905-113721968 (+)
NOD/ShiLtJ	ENSMUSG00190043418	lncRNA gene	Chr13:100150385-100160455 (+)
NZO/HlLtJ	ENSMUSG00225037576	lncRNA gene	Chr13:106041116-106051182 (+)
PWK/PhJ	ENSLUMG00010027074	lncRNA gene	Chr13:99188331-99198413 (+)
SPRET/EiJ	ENSMSPG00010009659	lncRNA gene	Chr13:100606185-100616402 (+)
WSB/EiJ	ENSIUOG00005036356	lncRNA gene	Chr13:99243670-99253740 (+)

Homology

• Gene Tree
  2610204G07Rik
  

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22

• Ensembl
  ENSMUSG00000084860 (Evidence)
• NCBI Gene
  72468

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000084860	Ensembl Gene Model | MGI Sequence Detail	10952	C57BL/6J
transcript	ENSMUST00000131215	Ensembl | MGI Sequence Detail	1880	Not Applicable

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 7
• Earliest
  J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
• Latest
  J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573

TSS for 2610204G07Rik:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr120933	Chr13:104821415-104821428 (+)	39 bp