Genome Analysis Tools
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- • Batch Query
- Input a list of gene IDs or symbols and retrieve other database IDs and gene attributes (e.g. phenotypes, GO).
- • MouseMine
- Access MGI data via InterMine.
- • Multiple Genome Viewer (MGV)
- Compare genome features of de novo sequenced mouse strains.
- • NCBI BLAST
- Search for sequence similarity using NCBI BLAST.
- • JAX Synteny Browser
- Explore the phenotype and functional attributes of genome features in regions of conserved synteny across mouse, human, and rat.
- • VLAD - Visual Annotation Display
- VLAD is a tool for visualizing GO annotations. The annotation data are a subset of those available at the GO web site. You specify an annotation data set and a set of genes, and the tool will produce a graphical summary of the annotations.
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