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Search Mouse SNPs
     
Search for SNPs by Associated Gene(s)
Associated Genes
Find SNPs Within or Near Specified Genes
Gene Symbol/Name: Search
Examples:   Fmr1   Pax*   Dnah5,Dnah6,Dnah7*

For the gene(s) specified above return all SNPs:

within the gene(s)
include 2 kb upstream and downstream of the gene(s)
include 10 kb upstream and downstream of the gene(s)

All SNP function classes will be returned.
You can filter SNPs by function class in the search results.
Strains and
Strain Comparisons
Compare to one or more Reference strains?

Reference strains
Include SNPs With No Allele Call in Some Reference strains? Yes   No  
Comparison strains
Include SNPs With No Allele Call in Some Comparison strains? Yes   No  
R
C
R
C
R
C
R
C
     
     
Search for SNPs by Genome Region - from GRCm39
Genome Region
Chromosome:
Genome Coordinates: (from GRCm39)

Examples:
125.618-125.622 Mbp
1-125618205 bp
125618205 - 999999999 bp
Marker Range: use current symbols
between and
Example: between D19Mit32 and Tbx10
You can filter SNPs by function class in the search results.
Strains and
Strain Comparisons
Compare to one or more Reference strains?

Reference strains
Include SNPs With No Allele Call in Some Reference strains? Yes   No  
Comparison strains
Include SNPs With No Allele Call in Some Comparison strains? Yes   No  
R
C
R
C
R
C
R
C
     
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory