About   Help   FAQ
On Friday, September 29 at 7:30AM ET, access to MGI will be intermittent for a short time due to maintenance.
C3H/HeJ Strain Detail
  • Strain Name
  • Attributes
    inbred strain
  • MGI ID
  • Synonyms
    C3, C3H Heston, C3H/HeJ-Pde6brd1
SNP Profile Heat Map
  • SNPs Involving C3H/HeJ
    96,802,133 from dbSNP Build 142
  • Comparison Strains
and QTL
12 associated mutations
399 associated QTL
Allele Marker
Aaom1C3H/HeJ Aaom1
Abhr1C3H/HeJ Abhr1
Abhr2C3H/HeJ Abhr2
Abhr3C3H/HeJ Abhr3
Adacm1C3H/HeJ Adacm1
Aevm1C3H/HeJ Aevm1
Aevm2C3H/HeJ Aevm2
Agnm1C3H/HeJ Agnm1
Agnm2C3H/HeJ Agnm2
Agnm3C3H/HeJ Agnm3
Alaa1C3H/HeJ Alaa1
Alaa2C3H/HeJ Alaa2
Alaa3C3H/HeJ Alaa3
Alaa4C3H/HeJ Alaa4
Albq15C3H/HeJ Albq15
Aldee1C3H/HeJ Aldee1
Aldee2C3H/HeJ Aldee2
Arvm1C3H/HeJ Arvm1
Arvm2C3H/HeJ Arvm2
Asm1C3H/HeJ Asm1
Asm2C3H/HeJ Asm2
Ath29C3H/HeJ Ath29
Ath30C3H/HeJ Ath30
Ath31C3H/HeJ Ath31
Ath32C3H/HeJ Ath32
Ath33C3H/HeJ Ath33
Athsq3C3H/HeJ Athsq3
Axtldb31C3H/HeJ Axtldb31
Axtldb33C3H/HeJ Axtldb33
Axtzm1C3H/HeJ Axtzm1
Axtzm2C3H/HeJ Axtzm2
BabrC3H/HeJ Babr
Bbaa14C3H/HeJ Bbaa14
Bbaa20C3H/HeJ Bbaa20
Bbaa25C3H/HeJ Bbaa25
Bbaa26C3H/HeJ Bbaa26
Bbaa29C3H/HeJ Bbaa29
Bglu3C3H/HeJ Bglu3
Bhr5C3H/HeJ Bhr5
Bhr6C3H/HeJ Bhr6
Bhr7C3H/HeJ Bhr7
Bmch1C3H/HeJ Bmch1
Bmch2C3H/HeJ Bmch2
Bmch3C3H/HeJ Bmch3
Bmch4C3H/HeJ Bmch4
Bmch5C3H/HeJ Bmch5
Bmch7C3H/HeJ Bmch7
Bmd3C3H/HeJ Bmd3
Bmd5C3H/HeJ Bmd5
Bmd5aC3H/HeJ Bmd5a
Bmd5bC3H/HeJ Bmd5b
Bmd5cC3H/HeJ Bmd5c
Bmd6C3H/HeJ Bmd6
Bmd7C3H/HeJ Bmd7
Bmd8C3H/HeJ Bmd8
Bmd9C3H/HeJ Bmd9
Bmd10C3H/HeJ Bmd10
Bmd11C3H/HeJ Bmd11
Bmd12C3H/HeJ Bmd12
Bmd13C3H/HeJ Bmd13
Bmd14C3H/HeJ Bmd14
Bmd15C3H/HeJ Bmd15
Bmd16C3H/HeJ Bmd16
Bmd19C3H/HeJ Bmd19
Bmd24C3H/HeJ Bmd24
Bmd25C3H/HeJ Bmd25
Bmd26C3H/HeJ Bmd26
Bmd39C3H/HeJ Bmd39
Bmd46C3H/HeJ Bmd46
Bodwt1C3H/HeJ Bodwt1
Bodwt2C3H/HeJ Bodwt2
Bpq8C3H/HeJ Bpq8
Bpq9C3H/HeJ Bpq9
Bpq24C3H/HeJ Bpq24
Bpq25C3H/HeJ Bpq25
Bpq26C3H/HeJ Bpq26
Brm1C3H/HeJ Brm1
Brm2C3H/HeJ Brm2
Brml1C3H/HeJ Brml1
Brml2C3H/HeJ Brml2
Brml3C3H/HeJ Brml3
Brml4C3H/HeJ Brml4
Brml5C3H/HeJ Brml5
Brml6C3H/HeJ Brml6
Brml7C3H/HeJ Brml7
Brml8C3H/HeJ Brml8
Brml9C3H/HeJ Brml9
Brml10C3H/HeJ Brml10
Brml11C3H/HeJ Brml11
Brml12C3H/HeJ Brml12
Brml13C3H/HeJ Brml13
Brml14C3H/HeJ Brml14
Bwhb1C3H/HeJ Bwhb1
Bwhb2C3H/HeJ Bwhb2
C7mlqC3H/HeJ C7mlq
Cafq1C3H/HeJ Cafq1
Cafq2C3H/HeJ Cafq2
Cafq3C3H/HeJ Cafq3
Cath1C3H/HeJ Cath1
Ccs6C3H/HeJ Ccs6
Ceih1C3H/HeJ Ceih1
Ceih2C3H/HeJ Ceih2
Ceih3C3H/HeJ Ceih3
Char2aC3H/HeJ Char2a
Char2bC3H/HeJ Char2b
Chlq1C3H/HeJ Chlq1
Chlq3C3H/HeJ Chlq3
Chlq4C3H/HeJ Chlq4
Chlq6C3H/HeJ Chlq6
Chlq8C3H/HeJ Chlq8
Chlq10C3H/HeJ Chlq10
Chlq11C3H/HeJ Chlq11
Chlq15C3H/HeJ Chlq15
Chlq18C3H/HeJ Chlq18
Criq1C3H/HeJ Criq1
CtrctsC3H/HeJ Ctrcts
Ctrq1C3H/HeJ Ctrq1
Ctrq2C3H/HeJ Ctrq2
Ctrq3C3H/HeJ Ctrq3
Dbsq1C3H/HeJ Dbsq1
Dbsq2C3H/HeJ Dbsq2
Dbsq3C3H/HeJ Dbsq3
Dbsq4C3H/HeJ Dbsq4
Dbsq5C3H/HeJ Dbsq5
Dbsq6C3H/HeJ Dbsq6
Dbsq7C3H/HeJ Dbsq7
Dbsq8C3H/HeJ Dbsq8
DermsC3H/HeJ Derms
Dfsit1C3H/HeJ Dfsit1
Dmyaq1C3H/HeJ Dmyaq1
Dmyaq2C3H/HeJ Dmyaq2
Dmyaq3C3H/HeJ Dmyaq3
Dntcs1C3H/HeJ Dntcs1
Dntcs2C3H/HeJ Dntcs2
Dssc1C3H/HeJ Dssc1
Dssc2C3H/HeJ Dssc2
Dyscalc2C3H/HeJ Dyscalc2
Dyscalc3C3H/HeJ Dyscalc3
Dyscalc4C3H/HeJ Dyscalc4
Ecbs1C3H/HeJ Ecbs1
Eia1C3H/HeJ Eia1
Eih1C3H/HeJ Eih1
Eih2C3H/HeJ Eih2
Eila1C3H/HeJ Eila1
Eila2C3H/HeJ Eila2
Eila3C3H/HeJ Eila3
Eiwa1C3H/HeJ Eiwa1
Eiwa2C3H/HeJ Eiwa2
Eiwax1C3H/HeJ Eiwax1
Eiwax2C3H/HeJ Eiwax2
Eiwax3C3H/HeJ Eiwax3
ElpfmC3H/HeJ Elpfm
Emo3C3H/HeJ Emo3
Epbs1C3H/HeJ Epbs1
Estq1C3H/HeJ Estq1
Estq2C3H/HeJ Estq2
Estq3C3H/HeJ Estq3
Estq4C3H/HeJ Estq4
Fbtq1C3H/HeJ Fbtq1
Fbtq2C3H/HeJ Fbtq2
Fbtq3C3H/HeJ Fbtq3
Fbtq4C3H/HeJ Fbtq4
Fbtq5C3H/HeJ Fbtq5
Fbtq6C3H/HeJ Fbtq6
Fbtq7C3H/HeJ Fbtq7
Fbtq8C3H/HeJ Fbtq8
Fmbmd1C3H/HeJ Fmbmd1
Fmbmd2C3H/HeJ Fmbmd2
Fmbmd3C3H/HeJ Fmbmd3
Fmbmd4C3H/HeJ Fmbmd4
Fmbmd5C3H/HeJ Fmbmd5
Fmbmd6C3H/HeJ Fmbmd6
Fmbmd7C3H/HeJ Fmbmd7
Fmbmd8C3H/HeJ Fmbmd8
Fmbmd9C3H/HeJ Fmbmd9
Fmbmd10C3H/HeJ Fmbmd10
Fmcd1C3H/HeJ Fmcd1
Fmcd2C3H/HeJ Fmcd2
Fmct1C3H/HeJ Fmct1
Fmct2C3H/HeJ Fmct2
Fmct3C3H/HeJ Fmct3
Fmct4C3H/HeJ Fmct4
Fmct5C3H/HeJ Fmct5
Fmct6C3H/HeJ Fmct6
Fmct7C3H/HeJ Fmct7
Fmctv1C3H/HeJ Fmctv1
Fmctv2C3H/HeJ Fmctv2
Fmctv3C3H/HeJ Fmctv3
Fmctv4C3H/HeJ Fmctv4
Fmctv5C3H/HeJ Fmctv5
Fmctv6C3H/HeJ Fmctv6
Fmgty1C3H/HeJ Fmgty1
Fmgty2C3H/HeJ Fmgty2
Fmgty3C3H/HeJ Fmgty3
Fmgty7C3H/HeJ Fmgty7
Fmgty8C3H/HeJ Fmgty8
Fmgty9C3H/HeJ Fmgty9
Fmgty11C3H/HeJ Fmgty11
Fmgty12C3H/HeJ Fmgty12
Fmld1C3H/HeJ Fmld1
Fmld2C3H/HeJ Fmld2
Fmld3C3H/HeJ Fmld3
Fmld4C3H/HeJ Fmld4
Fmls1C3H/HeJ Fmls1
Fmls2C3H/HeJ Fmls2
Fmls3C3H/HeJ Fmls3
Fmls4C3H/HeJ Fmls4
Fmls5C3H/HeJ Fmls5
Fmlv1C3H/HeJ Fmlv1
Fmlv2C3H/HeJ Fmlv2
Fmlv3C3H/HeJ Fmlv3
Fmlv4C3H/HeJ Fmlv4
Fmlv5C3H/HeJ Fmlv5
Fmlv6C3H/HeJ Fmlv6
Fmlv7C3H/HeJ Fmlv7
Fmlv8C3H/HeJ Fmlv8
Fmlv9C3H/HeJ Fmlv9
Fmlv10C3H/HeJ Fmlv10
Gofm1C3H/HeJ Gofm1
Gofm2C3H/HeJ Gofm2
Gofm3C3H/HeJ Gofm3
Gofm4C3H/HeJ Gofm4
Gria4spkw1 Gria4
Hcs7C3H/HeJ Hcs7
Hdl34C3H/HeJ Hdl34
Hdl35C3H/HeJ Hdl35
Hdl36C3H/HeJ Hdl36
Hdl37C3H/HeJ Hdl37
Hdl38C3H/HeJ Hdl38
Hdl39C3H/HeJ Hdl39
Hdl40C3H/HeJ Hdl40
Hdlq74C3H/HeJ Hdlq74
Hdlq76C3H/HeJ Hdlq76
Hdlq86C3H/HeJ Hdlq86
Hdlq91C3H/HeJ Hdlq91
Hdlq94C3H/HeJ Hdlq94
Hdlq96C3H/HeJ Hdlq96
HlpxC3H/HeJ Hlpx
HmdcC3H/HeJ Hmdc
Hsl1C3H/HeJ Hsl1
Hsm1C3H/HeJ Hsm1
HycdcC3H/HeJ Hycdc
Idd6C3H/HeJ Idd6
Idd6.1C3H/HeJ Idd6.1
Idd6.2C3H/HeJ Idd6.2
Idd6.3C3H/HeJ Idd6.3
Idd19C3H/HeJ Idd19
Idd20C3H/HeJ Idd20
Ifbl1C3H/HeJ Ifbl1
Ifbl2C3H/HeJ Ifbl2
Ifbl3C3H/HeJ Ifbl3
Ifbl4C3H/HeJ Ifbl4
Ifbl5C3H/HeJ Ifbl5
Ifbw1C3H/HeJ Ifbw1
Ifbw2C3H/HeJ Ifbw2
Ifbw3C3H/HeJ Ifbw3
Ifbw4C3H/HeJ Ifbw4
Igf1sl1C3H/HeJ Igf1sl1
Igf1sl2C3H/HeJ Igf1sl2
Igf1sl3C3H/HeJ Igf1sl3
Igf1sl4C3H/HeJ Igf1sl4
Inf1C3H/HeJ Inf1
Inf2qC3H/HeJ Inf2q
Itbq1C3H/HeJ Itbq1
Lfnq1C3H/HeJ Lfnq1
Lfnq2C3H/HeJ Lfnq2
Lfnq3C3H/HeJ Lfnq3
Lfnq4C3H/HeJ Lfnq4
Lfnq5C3H/HeJ Lfnq5
Lfnq6C3H/HeJ Lfnq6
Lfnq7C3H/HeJ Lfnq7
LhypC3H/HeJ Lhyp
Lifespan1C3H/HeJ Lifespan1
Lifespan2C3H/HeJ Lifespan2
Lifespan3C3H/HeJ Lifespan3
Lnopy1C3H/HeJ Lnopy1
Lprm1C3H/HeJ Lprm1
Lprm2C3H/HeJ Lprm2
Lprm3C3H/HeJ Lprm3
Lprm4C3H/HeJ Lprm4
Lprm5C3H/HeJ Lprm5
Lrnx11C3H/HeJ Lrnx11
Lrnx12C3H/HeJ Lrnx12
Mec1C3H/HeJ Mec1
Mec2C3H/HeJ Mec2
Mec3C3H/HeJ Mec3
Mec4C3H/HeJ Mec4
Mec5C3H/HeJ Mec5
Mec6C3H/HeJ Mec6
Methp1C3H/HeJ Methp1
MetpqC3H/HeJ Metpq
Mgdr1C3H/HeJ Mgdr1
Mgdr2C3H/HeJ Mgdr2
Modc1C3H/HeJ Modc1
Mom14C3H/HeJ Mom14
Mom15C3H/HeJ Mom15
Mom16C3H/HeJ Mom16
Mom17C3H/HeJ Mom17
Mom18C3H/HeJ Mom18
Nhdlq11C3H/HeJ Nhdlq11
Nhdlq12C3H/HeJ Nhdlq12
Nicoq1C3H/HeJ Nicoq1
Nicoq2C3H/HeJ Nicoq2
Nicoq3C3H/HeJ Nicoq3
Nicoq4C3H/HeJ Nicoq4
Nnc1C3H/HeJ Nnc1
Ossc1C3H/HeJ Ossc1
Ossc2C3H/HeJ Ossc2
Paam1C3H/HeJ Paam1
Paam2C3H/HeJ Paam2
Pas18C3H/HeJ Pas18
PidysC3H/HeJ Pidys
Pnhdlc6C3H/HeJ Pnhdlc6
Prdt6C3H/HeJ Prdt6
Pstc1C3H/HeJ Pstc1
Pstc2C3H/HeJ Pstc2
Pstc3C3H/HeJ Pstc3
Pstc4C3H/HeJ Pstc4
Pstc5C3H/HeJ Pstc5
Pubt1C3H/HeJ Pubt1
Ril6C3H/HeJ Ril6
Scpro3C3H/HeJ Scpro3
SialsC3H/HeJ Sials
Slt1C3H/HeJ Slt1
Slt2C3H/HeJ Slt2
Slt3C3H/HeJ Slt3
Slt4C3H/HeJ Slt4
Slt5C3H/HeJ Slt5
spkw2C3H/HeJ spkw2
Sst2C3H/HeJ Sst2
Sst3C3H/HeJ Sst3
Sst4C3H/HeJ Sst4
Sst5C3H/HeJ Sst5
Synch1C3H/HeJ Synch1
Synch3C3H/HeJ Synch3
Taste7C3H/HeJ Taste7
Taste8C3H/HeJ Taste8
Taste9C3H/HeJ Taste9
Taste10C3H/HeJ Taste10
Taste11C3H/HeJ Taste11
Taste12C3H/HeJ Taste12
Tbqt1C3H/HeJ Tbqt1
Tbqt2C3H/HeJ Tbqt2
Tbqt3C3H/HeJ Tbqt3
Tbqt4C3H/HeJ Tbqt4
Tbqt5C3H/HeJ Tbqt5
Tbqt6C3H/HeJ Tbqt6
Tbqt7C3H/HeJ Tbqt7
Tcq3C3H/HeJ Tcq3
Tgq32C3H/HeJ Tgq32
Tgq34C3H/HeJ Tgq34
Tnfsf4Ath1-C3H/HeJ Tnfsf4
Trigq3C3H/HeJ Trigq3
Trigq4C3H/HeJ Trigq4
Vactq1C3H/HeJ Vactq1
Vactq2C3H/HeJ Vactq2
Vmmt1C3H/HeJ Vmmt1
Vmmt2C3H/HeJ Vmmt2
Vmmt5C3H/HeJ Vmmt5
Vmmt8C3H/HeJ Vmmt8
Vmmt9C3H/HeJ Vmmt9
Vmmt10C3H/HeJ Vmmt10
Vmmt11C3H/HeJ Vmmt11
Vmmt12C3H/HeJ Vmmt12
Vmmt13C3H/HeJ Vmmt13
Vmmt15C3H/HeJ Vmmt15
Vmmt16C3H/HeJ Vmmt16
Vmmt18C3H/HeJ Vmmt18
Vmmt19C3H/HeJ Vmmt19
Vmmt20C3H/HeJ Vmmt20
Vtbt1C3H/HeJ Vtbt1
Vtbt2C3H/HeJ Vtbt2
Vtbt3C3H/HeJ Vtbt3
Vtbt4C3H/HeJ Vtbt4
Vtbt5C3H/HeJ Vtbt5
Vtbt6C3H/HeJ Vtbt6
Vtbt7C3H/HeJ Vtbt7
Vtbt8C3H/HeJ Vtbt8
Vtbt9C3H/HeJ Vtbt9
Vtbt10C3H/HeJ Vtbt10
Vtbt11C3H/HeJ Vtbt11
Vtbt12C3H/HeJ Vtbt12
Vtbt13C3H/HeJ Vtbt13
Vtbt14C3H/HeJ Vtbt14
Vtbt15C3H/HeJ Vtbt15
Vtbt16C3H/HeJ Vtbt16
Vtbt17C3H/HeJ Vtbt17
Vtbt18C3H/HeJ Vtbt18
Vtbt19C3H/HeJ Vtbt19
Vurm1C3H/HeJ Vurm1
Wtmq1C3H/HeJ Wtmq1
Wtmq2C3H/HeJ Wtmq2
Wtmq3C3H/HeJ Wtmq3
Wtmq4C3H/HeJ Wtmq4
Wtmq5C3H/HeJ Wtmq5
Wtmq6C3H/HeJ Wtmq6
Wtmq7C3H/HeJ Wtmq7
Wtmq8C3H/HeJ Wtmq8
Wtmq9C3H/HeJ Wtmq9
Phenotype Overview

adipose tissue
cardiovascular system
digestive/alimentary system
endocrine/exocrine glands
hematopoietic system
immune system
liver/biliary system
nervous system
normal phenotype
renal/urinary system
reproductive system
respiratory system

Click cells to view annotations.
Human Diseases

model 1 model 2
alopecia areata
electroclinical syndrome
retinitis pigmentosa 40
Key disease model expected model not found
Find Mice (IMSR)
1 associated strain record at IMSR
IMSR Repository IMSR Strain Why Matched
JAX:000659 JAX C3H/HeJ exact match to ID
  • Earliest
    J:2480 Strong LC, The Establishment of the C(3)H Inbred Strain of Mice for the Study of Spontaneous Carcinoma of the Mammary Gland. Genetics. 1935 Nov;20(6):586-91
  • All

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support.
last database update
MGI 6.22
The Jackson Laboratory