4930471G24Rik Gene Detail

Summary

• Symbol
  4930471G24Rik
• Name
  RIKEN cDNA 4930471G24 gene

• Feature Type
  lncRNA gene
• IDs
  MGI:1922189
  NCBI Gene: 74939
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:47821026-47821869 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  147 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1922189	lncRNA gene	Chr13:47801491-47822388 (+)
129S1/SvImJ	ENSMUSG00200036591	lncRNA gene	Chr13:45090074-45090916 (+)
A/J	ENSMUSG00195031252	lncRNA gene	Chr13:44145231-44146073 (+)
AKR/J	ENSMUSG00220009991	lncRNA gene	Chr13:43939923-43940765 (+)
BALB/cJ	ENSMUSG00180009068	lncRNA gene	Chr13:44447593-44448435 (+)
C3H/HeJ	ENSMUSG00175029939	lncRNA gene	Chr13:44411701-44412543 (+)
C57BL/6NJ	ENSMUSG00215007932	lncRNA gene	Chr13:44566189-44567031 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005031607	lncRNA gene	Chr13:44472957-44473797 (+)
CBA/J	ENSMUSG00210028604	lncRNA gene	Chr13:44417191-44418033 (+)
DBA/2J	ENSMUSG00185032972	lncRNA gene	Chr13:45237281-45238123 (+)
FVB/NJ	ENSMUSG00205012124	lncRNA gene	Chr13:44202845-44203687 (+)
JF1/MsJ	ENSUMUG00000017264	lncRNA gene	Chr13:44761801-44762638 (+)
LP/J	ENSMUSG00230030385	lncRNA gene	Chr13:54553122-54553964 (+)
NOD/ShiLtJ	ENSMUSG00190012606	lncRNA gene	Chr13:44642355-44643197 (+)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010022488	lncRNA gene	Chr13:43611883-43612725 (+)
SPRET/EiJ	ENSMSPG00010031679	lncRNA gene	Chr13:43724978-43725812 (+)
WSB/EiJ	ENSIUOG00005029293	lncRNA gene	Chr13:43780413-43781255 (+)

Homology

• Gene Tree
  4930471G24Rik
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving 4930471G24Rik
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  2

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  27
• RefSeq
  1

• Ensembl
  ENSMUSG00000114509 (Evidence)
• NCBI Gene
  74939

Representative Sequences			Length	Strain/Species
genomic	74939	NCBI Gene Model | MGI Sequence Detail	844	C57BL/6J
transcript	NR_153835	RefSeq | MGI Sequence Detail	693	ZRU/MplStud

Molecular
Reagents

• All nucleic 2

  cDNA 2

References

• Summaries
  All 10

  Phenotypes 3
• Earliest
  J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
• Latest
  J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573