1810034E14Rik Gene Detail

Summary

• Symbol
  1810034E14Rik
• Name
  RIKEN cDNA 1810034E14 gene

• Feature Type
  lncRNA gene
• IDs
  MGI:1913753
  NCBI Gene: 66503
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr13:64396514-64415959 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, 33.26 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  587 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1913753	lncRNA gene	Chr13:64396451-64419699 (+)
129S1/SvImJ	ENSMUSG00200017504	lncRNA gene	Chr13:60535810-60559010 (+)
A/J	ENSMUSG00195029261	lncRNA gene	Chr13:60702225-60725294 (+)
AKR/J	ENSMUSG00220045074	lncRNA gene	Chr13:59777463-59800740 (+)
BALB/cJ	ENSMUSG00180025217	lncRNA gene	Chr13:60992080-61015115 (+)
C3H/HeJ	ENSMUSG00175008406	lncRNA gene	Chr13:60818696-60841793 (+)
C57BL/6NJ	ENSMUSG00215014142	lncRNA gene	Chr13:60807588-60830810 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002826	antisense lncRNA gene	Chr13:59590025-59610763 (+)
CAST/EiJ	ENSTCUG00005012027	lncRNA gene	Chr13:61190299-61213003 (+)
CBA/J	ENSMUSG00210009349	lncRNA gene	Chr13:61018152-61041251 (+)
DBA/2J	ENSMUSG00185009858	lncRNA gene	Chr13:61855537-61878586 (+)
FVB/NJ	ENSMUSG00205045846	lncRNA gene	Chr13:59991265-60014163 (+)
JF1/MsJ	ENSUMUG00000038882	lncRNA gene	Chr13:61465623-61488863 (+)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190043981	lncRNA gene	Chr13:60764825-60787863 (+)
NZO/HlLtJ	ENSMUSG00225047374	lncRNA gene	Chr13:64916176-64939217 (+)
PWK/PhJ	ENSLUMG00010013413	lncRNA gene	Chr13:60312152-60335286 (+)
SPRET/EiJ	ENSMSPG00010035177	lncRNA gene	Chr13:60537646-60561287 (+)
WSB/EiJ	ENSIUOG00005026061	lncRNA gene	Chr13:59486363-59509272 (+)

Homology

• Gene Tree
  1810034E14Rik
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  6 phenotype references
  

• All Mutations and Alleles
  7
• Chemically induced (other)
  1
• Gene trapped
  6
• Genomic Mutations
  1 involving 1810034E14Rik
• Find Mice (IMSR)
  1 strains or lines available

Expression

• Assay Results
  606
• Tissues
  8
• cDNA Data
  4
• Literature Summary
  1

Tissue x Stage Matrix

• Other Mouse Links
  Allen Institute
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  30
• RefSeq
  1
• UniProt
  1

• Ensembl
  ENSMUSG00000097101 (Evidence)
• NCBI Gene
  66503

Representative Sequences			Length	Strain/Species
genomic	66503	NCBI Gene Model | MGI Sequence Detail	19446	C57BL/6J
transcript	NR_045798	RefSeq | MGI Sequence Detail	1802	C57BL/6
polypeptide	Q3UNW1	UniProt | EBI | MGI Sequence Detail	64	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 5

  cDNA 4

  Primer pair 1

  
  

  Microarray probesets 2

References

• Summaries
  All 20

  Developmental Gene Expression 1

  Phenotypes 6
• Earliest
  J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
• Latest
  J:263878 Aboudehen K, et al., Long noncoding RNA Hoxb3os is dysregulated in autosomal dominant polycystic kidney disease and regulates mTOR signaling. J Biol Chem. 2018 Jun 15;293(24):9388-9398

TSS for 1810034E14Rik:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr120204	Chr13:64396463-64396489 (+)	-38 bp