4930586N03Rik Gene Detail

Summary

• Symbol
  4930586N03Rik
• Name
  RIKEN cDNA 4930586N03 gene

• Feature Type
  lncRNA gene
• IDs
  MGI:1923137
  NCBI Gene: 75887
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr13:23497695-23569969 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, 9.55 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  624 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1923137	lncRNA gene	Chr13:23497695-23569969 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0015249	unclassified non-coding RNA gene	Chr13:20718276-20785230 (+)
A/J	MGP_AJ_G0015223	unclassified non-coding RNA gene	Chr13:20327934-20399194 (+)
AKR/J	MGP_AKRJ_G0015186	unclassified non-coding RNA gene	Chr13:20565380-20640841 (+)
BALB/cJ	MGP_BALBcJ_G0015185	unclassified non-coding RNA gene	Chr13:20318081-20389652 (+)
C3H/HeJ	MGP_C3HHeJ_G0015009	unclassified non-coding RNA gene	Chr13:20647475-20730249 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0015642	unclassified non-coding RNA gene	Chr13:21466513-21538439 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0013384	unclassified non-coding RNA gene	Chr13:19162000-19221862 (+)
CAST/EiJ	MGP_CASTEiJ_G0014562	unclassified non-coding RNA gene	Chr13:20343109-20412607 (+)
CBA/J	MGP_CBAJ_G0014988	unclassified non-coding RNA gene	Chr13:22275882-22349121 (+)
DBA/2J	MGP_DBA2J_G0015081	unclassified non-coding RNA gene	Chr13:19905462-19983801 (+)
FVB/NJ	MGP_FVBNJ_G0015092	unclassified non-coding RNA gene	Chr13:19531373-19598568 (+)
LP/J	MGP_LPJ_G0015162	unclassified non-coding RNA gene	Chr13:21045293-21111417 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0015119	unclassified non-coding RNA gene	Chr13:22631037-22701908 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0015681	unclassified non-coding RNA gene	Chr13:20439107-20503123 (+)
PWK/PhJ	MGP_PWKPhJ_G0014354	unclassified non-coding RNA gene	Chr13:19905244-19971194 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0014141	unclassified non-coding RNA gene	Chr13:19231730-19302693 (+)
WSB/EiJ	MGP_WSBEiJ_G0014665	unclassified non-coding RNA gene	Chr13:20542036-20610438 (+)

Homology

• Gene Tree
  4930586N03Rik
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  10 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  1
• Gene trapped
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving 4930586N03Rik
• Find Mice (IMSR)
  5 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000087097 (Evidence)
• NCBI Gene
  75887

Representative Sequences			Length	Strain/Species
genomic	75887	NCBI Gene Model | MGI Sequence Detail	72275	C57BL/6J
transcript	NR_131052	RefSeq | MGI Sequence Detail	881	C57BL/6

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 17

  Phenotypes 10
• Earliest
  J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
• Latest
  J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9