2010203P06Rik Gene Detail

Summary

• Symbol
  2010203P06Rik
• Name
  RIKEN cDNA 2010203P06 gene

• Feature Type
  lncRNA gene
• IDs
  MGI:1913797
  NCBI Gene: 66547
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr13:56731618-56750857 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  586 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1913797	lncRNA gene	Chr13:56731618-56755216 (+)
129S1/SvImJ	ENSMUSG00200016920	lncRNA gene	Chr13:53619362-53620489 (+)
A/J	ENSMUSG00195044616	lncRNA gene	Chr13:53087045-53088166 (+)
AKR/J	ENSMUSG00220044066	lncRNA gene	Chr13:52623979-52625082 (+)
BALB/cJ	ENSMUSG00180017719	lncRNA gene	Chr13:53332539-53333660 (+)
C3H/HeJ	ENSMUSG00175045387	lncRNA gene	Chr13:53118728-53119847 (+)
C57BL/6NJ	ENSMUSG00215040748	lncRNA gene	Chr13:53146077-53147183 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005040153	lncRNA gene	Chr13:53532170-53533297 (+)
CBA/J	ENSMUSG00210041507	lncRNA gene	Chr13:53323667-53324786 (+)
DBA/2J	ENSMUSG00185017765	lncRNA gene	Chr13:54170636-54171763 (+)
FVB/NJ	ENSMUSG00205046502	lncRNA gene	Chr13:52970602-52971707 (+)
JF1/MsJ	ENSUMUG00000037016	lncRNA gene	Chr13:53573174-53574301 (+)
LP/J	ENSMUSG00230035357	lncRNA gene	Chr13:63522885-63524004 (+)
NOD/ShiLtJ	ENSMUSG00190033956	lncRNA gene	Chr13:53222253-53223380 (+)
NZO/HlLtJ	ENSMUSG00225035278	lncRNA gene	Chr13:57242759-57243870 (+)
PWK/PhJ	ENSLUMG00010023521	lncRNA gene	Chr13:52458491-52459607 (+)
SPRET/EiJ	ENSMSPG00010041007	lncRNA gene	Chr13:52862217-52863335 (+)
WSB/EiJ	ENSIUOG00005027145	lncRNA gene	Chr13:52644133-52645242 (+)

Homology

• Gene Tree
  2010203P06Rik
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving 2010203P06Rik
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  2

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  41
• RefSeq
  5

• Ensembl
  ENSMUSG00000114604 (Evidence)
• NCBI Gene
  66547

Representative Sequences			Length	Strain/Species
genomic	66547	NCBI Gene Model | MGI Sequence Detail	19240	C57BL/6J
transcript	AK008432	GenBank | ENA | DDBJ | MGI Sequence Detail	509	C57BL/6J

Molecular
Reagents

• All nucleic 2

  cDNA 2

  
  

  Microarray probesets 1

References

• Summaries
  All 11

  Phenotypes 3
• Earliest
  J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
• Latest
  J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573

TSS for 2010203P06Rik:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr120024	Chr13:56744137-56744168 (+)	12,535 bp