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2010001K21Rik Gene Detail
Summary
  • Symbol
    2010001K21Rik
  • Name
    RIKEN cDNA 2010001K21 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1917079
    NCBI Gene: 69829
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr13:47133384-47164667 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 13, 24.50 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    345 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1917079
 lncRNA gene Chr13:47133384-47164667 (+)
129S1/SvImJ MGP_129S1SvImJ_G0036397
 pseudogene Chr13:45816641-45817159 (+)
A/J MGP_AJ_G0036383
 pseudogene Chr13:44217237-44217755 (+)
AKR/J MGP_AKRJ_G0036333
 pseudogene Chr13:45430458-45430980 (+)
BALB/cJ MGP_BALBcJ_G0036375
 pseudogene Chr13:44423400-44423918 (+)
C3H/HeJ MGP_C3HHeJ_G0036069
 pseudogene Chr13:45294973-45295491 (+)
C57BL/6NJ MGP_C57BL6NJ_G0036884
 pseudogene Chr13:47197497-47198019 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0033999
 pseudogene Chr13:42261879-42262383 (+)
CAST/EiJ MGP_CASTEiJ_G0035266
 pseudogene Chr13:45235682-45236200 (+)
CBA/J MGP_CBAJ_G0036041
 pseudogene Chr13:49157118-49157636 (+)
DBA/2J MGP_DBA2J_G0036214
 pseudogene Chr13:43771594-43772112 (+)
FVB/NJ MGP_FVBNJ_G0036167
 pseudogene Chr13:43289421-43289939 (+)
LP/J MGP_LPJ_G0036268
 pseudogene Chr13:46037344-46037862 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0036170
 pseudogene Chr13:48982850-48983368 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0036992
 pseudogene Chr13:45130698-45131216 (+)
PWK/PhJ MGP_PWKPhJ_G0034966
 pseudogene Chr13:43904436-43904958 (+)
SPRET/EiJ MGP_SPRETEiJ_G0034783
 pseudogene Chr13:43803269-43803790 (+)
WSB/EiJ MGP_WSBEiJ_G0035456
 pseudogene Chr13:45438658-45439180 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    2
Sequences &
Gene Models
less
  • All Sequences
    28
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000051606 Ensembl Gene Model | MGI Sequence Detail 31284 C57BL/6J ±  kb
transcript ENSMUST00000224451 Ensembl | MGI Sequence Detail 3192 Not Applicable  
polypeptide Q9CVI8 UniProt | EBI | MGI Sequence Detail 174 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2

    Microarray probesets 2
References
more
  • Summaries
    All 13
    Phenotypes 3
  • Earliest
    J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/23/2024
MGI 6.23 		The Jackson Laboratory