4930511O05Rik Gene Detail

Summary

• Symbol
  4930511O05Rik
• Name
  RIKEN cDNA 4930511O05 gene

• Feature Type
  lncRNA gene
• IDs
  MGI:1922371
  NCBI Gene: 75121
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:27476598-27490019 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, 12.38 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  483 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1922371	lncRNA gene	Chr13:27476598-27490019 (+)
129S1/SvImJ	ENSMUSG00200033150	lncRNA gene	Chr13:24636326-24649743 (+)
A/J	ENSMUSG00195038595	lncRNA gene	Chr13:23774506-23787930 (+)
AKR/J	ENSMUSG00220013036	lncRNA gene	Chr13:23584038-23597465 (+)
BALB/cJ	ENSMUSG00180026165	lncRNA gene	Chr13:24079752-24093179 (+)
C3H/HeJ	ENSMUSG00175033728	lncRNA gene	Chr13:24102427-24115848 (+)
C57BL/6NJ	ENSMUSG00215015954	lncRNA gene	Chr13:24241432-24254849 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0004931	lincRNA gene	Chr13:23007096-23018770 (+)
CAST/EiJ	ENSTCUG00005010711	lncRNA gene	Chr13:24255309-24268814 (+)
CBA/J	ENSMUSG00210028202	lncRNA gene	Chr13:24046693-24060114 (+)
DBA/2J	ENSMUSG00185022159	lncRNA gene	Chr13:24868642-24882061 (+)
FVB/NJ	ENSMUSG00205030739	lncRNA gene	Chr13:23865838-23879239 (+)
JF1/MsJ	ENSUMUG00000024651	lncRNA gene	Chr13:24498713-24512153 (+)
LP/J	ENSMUSG00230022107	lncRNA gene	Chr13:34190036-34203457 (+)
NOD/ShiLtJ	ENSMUSG00190037936	lncRNA gene	Chr13:23850706-23864125 (+)
NZO/HlLtJ	ENSMUSG00225046414	lncRNA gene	Chr13:27976246-27989668 (+)
PWK/PhJ	ENSLUMG00010030777	lncRNA gene	Chr13:23334616-23348038 (+)
SPRET/EiJ	ENSMSPG00010027214	lncRNA gene	Chr13:23284983-23296036 (+)
WSB/EiJ	ENSIUOG00005016595	lncRNA gene	Chr13:23423819-23437230 (+)

Homology

• Gene Tree
  4930511O05Rik
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  8 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving 4930511O05Rik
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23

• Ensembl
  ENSMUSG00000086698 (Evidence)
• NCBI Gene
  75121

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000086698	Ensembl Gene Model | MGI Sequence Detail	13422	C57BL/6J
transcript	ENSMUST00000155912	Ensembl | MGI Sequence Detail	391	Not Applicable

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 15

  Phenotypes 8
• Earliest
  J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
• Latest
  J:141688 Goldsworthy M, et al., Role of the transcription factor sox4 in insulin secretion and impaired glucose tolerance. Diabetes. 2008 Aug;57(8):2234-44