Mapping Data

Experiment

• Experiment
  TEXT-Physical Mapping
• Chromosome
  17
• Reference
  J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
• ID
  MGI:2449334

Genes

Gene	Assay Type
Tsr3	assembly
1110038B12Rik	assembly
Mad2l1bp	assembly
Ndufb10	assembly
Mettl26	assembly
Atat1	assembly
0610012D04Rik	assembly
Wdr27	assembly
Kank3	assembly
Memo1	assembly
Nudt12	assembly
Zfp414	assembly
Cyp4f13	assembly
Ggnbp1	assembly
Galnt14	assembly
H2-Q6	assembly
Rpp21	assembly
Tbc1d22bos	assembly
Cuta	assembly
Elob	assembly
Tjap1	assembly
0710001D07Rik	assembly
1110038B12Rik	assembly
Mrpl18	assembly
Cebpzos	assembly
Tomm6	assembly
Mta3	assembly
Qki	assembly
Slc35b2	assembly
Mrpl14	assembly
Tmem242	assembly
Glo1	assembly
Zbtb22	assembly
Nudt3	assembly
Mtcl1	assembly
Tsr3	assembly
Polr1h	assembly
Ptx4	assembly
Ppp1r21	assembly
1110020A21Rik	assembly
Bltp3a	assembly
Ccdc167	assembly
Fahd1	assembly
Fndc1	assembly
1110033F14Rik	assembly
Ttc7	assembly
1110038B12Rik	assembly
Taf11	assembly
Trmt61b	assembly
1110051A18Rik	assembly
Rpl3l	assembly
1110058D11Rik	assembly
Rgmb	assembly
1190001L17Rik	assembly
Vars2	assembly
Telo2	assembly
Ergic1	assembly
Ubxn6	assembly
Pi16	assembly
Foxp4	assembly
Mdga1	assembly
Klc4	assembly
Zfp946	assembly
Unkl	assembly
Klhdc3	assembly
Plin3	assembly
Cmtr1	assembly
Calm2	assembly
Myl12b	assembly
Paqr4	assembly
Rpl7l1	assembly
Ndufv3	assembly
Grep1	assembly
Tedc2	assembly
1600012H06Rik	assembly
1600014C23Rik	assembly
Tbc1d5	assembly
1600022D10Rik	assembly
Cnpy3	assembly
1700001C07Rik	assembly
Cimip3	assembly
Pxt1	assembly
Ttc7	assembly
Pacrg	assembly
1700008K24Rik	assembly
1700010I14Rik	assembly
Tekt4	assembly
Rnf151	assembly
Stpg4	assembly
Spats1	assembly
Rsph3a	assembly
Pgp	assembly
Arrdc5	assembly
1700016K05Rik	assembly
Polr1has	assembly
1700022N22Rik	assembly
Dino	assembly
Btbd9	assembly
Clip4	assembly
1700024P12Rik	assembly
1700025K24Rik	assembly
Rsph9	assembly
Actl9	assembly
1700030A11Rik	assembly
1700030P01Rik	assembly
1700031A10Rik	assembly
1700038P13Rik	assembly
1700049J03Rik	assembly
Acsbg3	assembly
Nrxn1	assembly
1700063J08Rik	assembly
Zfp763	assembly
1700067P10Rik	assembly
1700071M16Rik	assembly
Snhg9	assembly
Clip4	assembly
1700082C02Rik	assembly
Tmem247	assembly
Rab31	assembly
1700097N02Rik	assembly
1700102H20Rik	assembly
Camkmt	assembly
1700106O07Rik	assembly
1700110C19Rik	assembly
4930548J01Rik	assembly
1700116H05Rik	assembly
1700122H20Rik	assembly
1700122O11Rik	assembly
Lbh	assembly
Trim15	assembly
1810013A23Rik	assembly
Twsg1	assembly
1810014P07Rik	assembly
Gpr108	assembly
Socs5	assembly
Mcfd2	assembly
Cuta	assembly
Metrn	assembly
Cul9	assembly
Pdia2	assembly
Luc7l	assembly
Phf10	assembly
1810057I12Rik	assembly
Cuta	assembly
1810073O08Rik	assembly
Prss32	assembly
Bnip1	assembly
Ndufa11	assembly
Heatr5b	assembly
2010106C02Rik	assembly
2010106G04Rik	assembly
Atl2	assembly
Riok2	assembly
Lnpep	assembly
Rps10	assembly
Slc44a4	assembly
2300002M23Rik	assembly
Foxp4	assembly
Wdr46	assembly
Ppp1r18	assembly
2310015A16Rik	assembly
Rftn1	assembly
Cyp4f16	assembly
Acer1	assembly
Yipf4	assembly
2310039H08Rik	assembly
Stub1	assembly
Alkbh7	assembly
Tmem242	assembly
Rpusd1	assembly
2310061I04Rik	assembly
Ephx3	assembly
Supt3	assembly
Slc25a23	assembly
Ypel5	assembly
Plin5	assembly
BC004004	assembly
Lmf1	assembly
Kctd20	assembly
Ermardl2	assembly
Micos13	assembly
2410017I17Rik	assembly
2410021H03Rik	assembly
Cnpy3	assembly
Sult6b1	assembly
Riok2	assembly
Ndufaf7	assembly
2410137M14Rik	assembly
Cul7	assembly
Alkbh7	assembly
Unc5cl	assembly
Tspo2	assembly
Rrp1b	assembly
1110020A21Rik	assembly
Tnfaip8l1	assembly
Jmjd8	assembly
Atat1	assembly
Rab26os	assembly
Ndc80	assembly
Hnrnpm	assembly
Ranbp3	assembly
Ppp1r10	assembly
2610029K11Rik	assembly
Kctd5	assembly
Zfp318	assembly
Pdzph1	assembly
Zfp820	assembly
2610037P13Rik	assembly
Atat1	assembly
Nrm	assembly
Lpin2	assembly
Ttc27	assembly
Cenpq	assembly
2610529L02Rik	assembly
Xpo5	assembly
Cuta	assembly
Eme2	assembly
Haghl	assembly
Thumpd2	assembly
2810034D10Rik	assembly
Hnrnpll	assembly
Airn	assembly
Tbcc	assembly
Fam98a	assembly
Gtf2f1	assembly
Wtap	assembly
Dpy30	assembly
Flywch2	assembly
Tmem178	assembly
2810427A07Rik	assembly
Vit	assembly
Jpt2	assembly
Airn	assembly
Fance	assembly
Prepl	assembly
Pot1b	assembly
Cerox1	assembly
Ankrd12	assembly
2900001G08Rik	assembly
Uqcc2	assembly
Yju2	assembly
2900042E19Rik	assembly
2900054C15Rik	assembly
Myl12a	assembly
Dact2	assembly
2900084O13Rik	assembly
Tiam2	assembly
3110005L21Rik	assembly
3110013M02Rik	assembly
Safb	assembly
Mocs1	assembly
Zfp942	assembly
Zfp983	assembly
Atat1	assembly
Ptchd4	assembly
3222402N08Rik	assembly
Wdr90	assembly
Foxn2	assembly
Sgo1	assembly
Caskin1	assembly
3300005D01Rik	assembly
Slc25a27	assembly
Rnf8	assembly
Mpc1	assembly
Zbtb9	assembly
Sos1	assembly
Dennd1c	assembly
4631402F24Rik	assembly
Togaram2	assembly
Adgrf4	assembly
Ddx11	assembly
Cyp4f39	assembly
Kdm4b	assembly
Lnpep	assembly
Dnase1l2	assembly
Prss22	assembly
4833413E03Rik	assembly
Clip4	assembly
4833418N02Rik	assembly
4833427F10Rik	assembly
4833447I15Rik	assembly
Phf8l	assembly
4921513D11Rik	assembly
Spdya	assembly
Ston1	assembly
Catsperd	assembly
4930406M16Rik	assembly
4930429F11Rik	assembly
4930432N10Rik	assembly
Zfp943	assembly
4930435F05Rik	assembly
4930442P07Rik	assembly
Eml4	assembly
4930452A19Rik	assembly
4930453J04Rik	assembly
4930470H14Rik	assembly
4930471L23Rik	assembly
4930474M22Rik	assembly
4930480K15Rik	assembly
4930500A05Rik	assembly
Nudt12os	assembly
4930506C21Rik	assembly
Armc12	assembly
Serac1	assembly
4930515G13Rik	assembly
Rsph3a	assembly
Meiob	assembly
Skic2	assembly
Bnip5	assembly
Prr3	assembly
4930542M03Rik	assembly
Spaca6	assembly
4930548J01Rik	assembly
Cep43	assembly
4930553P13Rik	assembly
4930556A12Rik	assembly
4930556A20Rik	assembly
Prkd3	assembly
Ttc39d	assembly
4930563A19Rik	assembly
4930564C03Rik	assembly
4930568E02Rik	assembly
4930579D07Rik	assembly
Or14j9	assembly
4930583I09Rik	assembly
4930597E08Rik	assembly
Smchd1	assembly
4931413I07Rik	assembly
Prss41	assembly
Fam120b	assembly
Pabpc6	assembly
Spats1	assembly
4933400B14Rik	assembly
4933401D09Rik	assembly
Dync2li1	assembly
4933407O12Rik	assembly
Tmem217	assembly
Dlgap1	assembly
4933423N03Rik	assembly
4930452A19Rik	assembly
4933426B08Rik	assembly
4933433H22Rik	assembly
Treml4	assembly
Adgrf1	assembly
5031415H12Rik	assembly
Srrm2	assembly
Safb	assembly
5330430B06Rik	assembly
5430410E06Rik	assembly
5430411C19Rik	assembly
Rfx2	assembly
Ppp1r18os	assembly
Tcf19	assembly
Lrfn2	assembly
Qpct	assembly
Tmem242	assembly
Amdhd2	assembly
Prkd3	assembly
Clic5	assembly
5730563F14Rik	assembly
Prkce	assembly
Clip4	assembly
Ubash3a	assembly
5830433I10Rik	assembly
5830436I19Rik	assembly
5830444F18Rik	assembly
5830454J16Rik	assembly
Ube2i	assembly
Stk38	assembly
5930436O19Rik	assembly
Cyp4f41-ps	assembly
Chtf18	assembly
Foxn2	assembly
Zfp799	assembly
6330415G19Rik	assembly
Zfp944	assembly
Fbxl17	assembly
6430537K16Rik	assembly
Def6	assembly
Dpp9	assembly
6530411M01Rik	assembly
Zfp160	assembly
Adgrf5	assembly
Ptk7	assembly
8430430B14Rik	assembly
9030409C19Rik	assembly
Ciao3	assembly
Zfp871	assembly
9130008F23Rik	assembly
Themis3	assembly
Ccnd3	assembly
9330112F22Rik	assembly
Nrxn1	assembly
9330136K24Rik	assembly
9330159H11Rik	assembly
9330164J24Rik	assembly
Lhfpl5	assembly
Arid1b	assembly
9430032L10Rik	assembly
Wtap	assembly
Srsf7	assembly
Tbl3	assembly
Slc25a27	assembly
Trerf1	assembly
Prepl	assembly
9530029F08Rik	assembly
9530032E18Rik	assembly
Marchf2	assembly
Map4k3	assembly
Mcrip2	assembly
Runx2os2	assembly
9530075M24Rik	assembly
9530079D04Rik	assembly
Stk38	assembly
Prr18	assembly
9630025F12Rik	assembly
9630028I04Rik	assembly
Bricd5	assembly
A130022J21Rik	assembly
A230009B12Rik	assembly
Heatr5b	assembly
A230051N06Rik	assembly
Nrxn1	assembly
Akain1	assembly
A330072L02Rik	assembly
A330106M24Rik	assembly
Birc6	assembly
Birc6	assembly
A430055H19Rik	assembly
Rasal3	assembly
Galm	assembly
Trem4	assembly
Zfp945	assembly
A630049H14Rik	assembly
A630084N20Rik	assembly
Scaf8	assembly
A730006G06Rik	assembly
L3mbtl4	assembly
Rab11b	assembly
Rab26	assembly
Pacsin1	assembly
Cpne5	assembly
A830092I05Rik	assembly
Crebrf	assembly
A930002H24Rik	assembly
A930003K04Rik	assembly
Kat2b	assembly
A930009K04Rik	assembly
Prr35	assembly
Ly6g6d	assembly
A930025A13Rik	assembly
Scaf8	assembly
Neu1	assembly
Atl2	assembly
Tnfrsf21	assembly
Enpp4	assembly
Abca3	assembly
Abca3	assembly
Abcg1	assembly
Abcg8	assembly
Ager	assembly
Agpat4	assembly
Cramp1	assembly
Zfp101	assembly
Ldhal6b	assembly
Frs3	assembly
Eif2ak2	assembly
Akap8	assembly
Angptl4	assembly
Apom	assembly
Atp6v0c	assembly
Atp6v0e	assembly
Atp6v1e2	assembly
Atp6v1g2	assembly
Catsperd	assembly
Ticam1	assembly
Ttbk1	assembly
D930007N19Rik	assembly
D230046O15Rik	assembly
Tubb5	assembly
Spaca6	assembly
Arid1b	assembly
Mog	assembly
B230354K17Rik	assembly
B3galt4	assembly
Trem6l	assembly
Zdhhc14	assembly
Airn	assembly
Bak1	assembly
Birc6	assembly
C030004M13Rik	assembly
C030011I16Rik	assembly
C030013G03Rik	assembly
C030034I22Rik	assembly
Fbxl17	assembly
Kcnh8	assembly
Cul7	assembly
C230013L11Rik	assembly
C230029D21Rik	assembly
St6gal2	assembly
C230072F16Rik	assembly
Gm9320	assembly
Neurl1b	assembly
C230085N15Rik	assembly
Myo1f	assembly
C430019F06Rik	assembly
Zfp955b	assembly
C430042M11Rik	assembly
C530035A18Rik	assembly
Tbc1d24	assembly
C530047H08Rik	assembly
Caskin1	assembly
Zfp945	assembly
B930007P11Rik	assembly
Zfp952	assembly
H2-T11-ps	assembly
Calm2	assembly
Ccr6	assembly
Cd2ap	assembly
Cdc42ep3	assembly
Cebpz	assembly
Cldn6	assembly
Cox7a2l	assembly
Crim1	assembly
Cyp1b1	assembly
Cyp39a1	assembly
Cyp4f14	assembly
Prepl	assembly
Rab11fip3	assembly
Zfp53	assembly
Kif6	assembly
D130011O08Rik	assembly
D130052P04Rik	assembly
Pex6	assembly
Mmut	assembly
Zfp81	assembly
Heatr5b	assembly
Vps52	assembly
Myom1	assembly
Srbd1	assembly
Zfp318	assembly
Slc25a27	assembly
Birc6	assembly
D630014O11Rik	assembly
Ankrd66	assembly
D830013E24Rik	assembly
Slc8a1	assembly
L3mbtl4	assembly
Memo1	assembly
Daam2	assembly
Eci1	assembly
Dhx16	assembly
Def6	assembly
Flywch1	assembly
Trim39	assembly
Six3os1	assembly
Ubr2	assembly
E130303B20Rik	assembly
Mpnd	assembly
E230001N04Rik	assembly
Fpr2	assembly
E430014B02Rik	assembly
E430024P14Rik	assembly
Ehd3	assembly
Mmp25	assembly
F830004D09Rik	assembly
F830028O17Rik	assembly
Fbxl17	assembly
Fer	assembly
Flot1	assembly
Fshr	assembly
Fut4-ps1	assembly
Mlst8	assembly
Gemin6	assembly
Gng13	assembly
Gnmt	assembly
Gtf2a1l	assembly
Gtf2h4	assembly
Gtpbp2	assembly
Haao	assembly
Hsf2bp	assembly
Ier3	assembly
Igfals	assembly
Isg15	assembly
Kremen2	assembly
Lbh	assembly
Lix1	assembly
Lpin2	assembly
Lrg1	assembly
Ltbp1	assembly
Ly6g6c	assembly
Ly6g6e	assembly
Map4k3	assembly
Afdn	assembly
Mrpl2	assembly
Mrpl28	assembly
Mrps10	assembly
Mrps18a	assembly
Mrps18b	assembly
Mtch1	assembly
Akap8l	assembly
Ndufa7	assembly
Ndufv2	assembly
Nfkbie	assembly
Sapcd1	assembly
Nme3	assembly
Nme4	assembly
Noxo1	assembly
Uhrf1	assembly
Nrxn1	assembly
Nthl1	assembly
Ntn3	assembly
Prkn	assembly
Pde10a	assembly
Pde9a	assembly
Wdr43	assembly
Pigq	assembly
Pla2g7	assembly
Polh	assembly
Ppil1	assembly
Ppp2r1a	assembly
Ppp4r1	assembly
Ppt2	assembly
Prkce	assembly
Lonp1	assembly
Prss21	assembly
Rab12	assembly
Rgs11	assembly
H2-Ab1	assembly
Rnps1	assembly
Rpl10a	assembly
Rps28	assembly
Satb1	assembly
Sbp	assembly
Slc29a1	assembly
Slc3a1	assembly
Slc5a7	assembly
Nherf2	assembly
Smoc2	assembly
Snx9	assembly
Capn15	assembly
Spast	assembly
Strn	assembly
Stub1	assembly
Sult1c2	assembly
Syngr3	assembly
Synj2	assembly
Taf8	assembly
Spsb3	assembly
Mrps34	assembly
Cramp1	assembly
Tgif1	assembly
Pgap6	assembly
Tnfrsf12a	assembly
Trem1	assembly
Trem3	assembly
Treml1	assembly
Med20	assembly
Trim10	assembly
Trim39	assembly
Trip10	assembly
Tubb5	assembly
U2af1	assembly
Ubd	assembly
Ube2i	assembly
Ubxn6	assembly
Vapa	assembly
Ezr	assembly
Wdr4	assembly
Wiz	assembly
Zfp57	assembly
Zfp97	assembly
Znrf4	assembly
Rps6ka2	assembly
Gtf2h5	assembly
Qki	assembly
Map3k4	assembly
Chd1	assembly
Igf2r	assembly
Mas1	assembly
Cacna1h	assembly
Acat2	assembly
Sod2	assembly
Mpc1	assembly
Tcte2	assembly
Sox8	assembly
Thbs2	assembly
Dynlt2a1	assembly
Psmb1	assembly
Pdcd2	assembly
Clcn7	assembly
Mapk8ip3	assembly
Nubp2	assembly
Msrb1	assembly
Ccnf	assembly
Pkd1	assembly
Luc7l	assembly
E4f1	assembly
Ilrun	assembly
Fkbp5	assembly
Srpk1	assembly
Hmga1	assembly
Rsph1	assembly
Tcp11	assembly
Hsp90ab1	assembly
Phf1	assembly
Cdkn1a	assembly
Pim1	assembly
Umodl1	assembly
Tff1	assembly
Tff2	assembly
Tff3	assembly
Clps	assembly
Cbs	assembly
Myo1f	assembly
Cd320	assembly
Pknox1	assembly
Pfdn6	assembly
Tapbp	assembly
Rps18	assembly
Rxrb	assembly
H2-Oa	assembly
Psmb9	assembly
Tap2	assembly
H2-Aa	assembly
H2-Eb1	assembly
Rnf5	assembly
Nelfe	assembly
Ehmt2	assembly
Hspa1b	assembly
Msh5	assembly
Hspa1l	assembly
D17H6S56E-5	assembly
Gpank1	assembly
Csnk2b	assembly
Vars1	assembly
Bag6	assembly
Prrc2a	assembly
Aif1	assembly
Ddx39b	assembly
H2-Q8	assembly
Ppp1r11	assembly
Mog	assembly
Abcf1	assembly
Crisp1	assembly
Ddr1	assembly
Bysl	assembly
Mmut	assembly
Crisp2	assembly
Apobec2	assembly
Yipf3	assembly
Mea1	assembly
Dazl	assembly
Nfya	assembly
Ccnd3	assembly
Pgc	assembly
Rab5a	assembly
Nrtn	assembly
Clpp	assembly
Adgre4	assembly
Tubb4a	assembly
Khsrp	assembly
Rfx2	assembly
Mydgf	assembly
Fem1a	assembly
Lama1	assembly
Ralbp1	assembly
Twsg1	overlapping clones, direct sequencing
Ptprm	assembly
Zbtb14	assembly
Epb41l3	assembly
Xdh	assembly
Msh2	assembly
Lhcgr	assembly
Msh6	assembly
Ppm1b	assembly

Notes

• Reference
  The markers listed below for this experiment were mapped to mouse chromosomes based on sequence similarities to the Mouse Genome Sequencing Consortium (MGSC V3) assembly. Chromosomal locations were obtained from the Genome Exploration Research Group of the RIKEN Institute of Physical and Chemical Research in Japan. Where multiple RIKEN clones were associated to the same marker by sequence similarity clustering, mapping data were loaded only if all RIKEN clones from the same cluster mapped to the same mouse chromosome.