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1110020A21Rik Gene Detail
Summary
  • Symbol
    1110020A21Rik
  • Name
    RIKEN cDNA 1110020A21 gene
  • Synonyms
    2600015P10Rik
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1915781
    NCBI Gene: 68531
  • Alliance
    genome feature page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr17:85224610-85265138 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 17, 55.13 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    1493 from dbSNP Build 142
  • Strain Annotations
    16
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1915781
 lncRNA gene Chr17:85223753-85265403 (-)
129S1/SvImJ ENSMUSG00200025683
 lncRNA gene Chr17:80627617-80667509 (-)
A/J ENSMUSG00195029002
 lncRNA gene Chr17:82001033-82040930 (-)
AKR/J ENSMUSG00220014184
 lncRNA gene Chr17:80958630-80997664 (-)
BALB/cJ ENSMUSG00180026596
 lncRNA gene Chr17:81673374-81713914 (-)
C3H/HeJ ENSMUSG00175006921
 lncRNA gene Chr17:80939341-80979230 (-)
C57BL/6NJ ENSMUSG00215016332
 lncRNA gene Chr17:80666848-80707395 (-)
CAROLI/EiJ no annotation
CAST/EiJ ENSTCUG00005011847
 lncRNA gene Chr17:81499089-81541415 (-)
CBA/J ENSMUSG00210020874
 lncRNA gene Chr17:80798057-80837952 (-)
DBA/2J ENSMUSG00185021478
 lncRNA gene Chr17:83615431-83653930 (-)
FVB/NJ ENSMUSG00205006170
 lncRNA gene Chr17:81427361-81467100 (-)
JF1/MsJ ENSUMUG00000017005
 lncRNA gene Chr17:83348430-83388441 (-)
LP/J no annotation
NOD/ShiLtJ ENSMUSG00190010046
 lncRNA gene Chr17:80695030-80734767 (-)
NZO/HlLtJ no annotation
PWK/PhJ ENSLUMG00010005510
 lncRNA gene Chr17:80562200-80602108 (-)
SPRET/EiJ ENSMSPG00010008762
 lncRNA gene Chr17:81134519-81181438 (-)
WSB/EiJ ENSIUOG00005022552
 lncRNA gene Chr17:81618980-81658839 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
  • cDNA Data
    5
Sequences &
Gene Models
less
  • All Sequences
    38
  • RefSeq
    2
Representative SequencesLengthStrain/SpeciesFlank
genomic 68531 NCBI Gene Model | MGI Sequence Detail 40529 C57BL/6J ±  kb
transcript NR_027930 RefSeq | MGI Sequence Detail 853 Not Specified  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 5
    cDNA 5

    Microarray probesets 3
Other
Accession IDs
less
MGI:1923837
References
more
  • Summaries
    All 18
    Phenotypes 4
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/01/2026
MGI 6.24 		The Jackson Laboratory