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Sapcd1 Gene Detail
Summary
  • Symbol
    Sapcd1
  • Name
    suppressor APC domain containing 1
  • Synonyms
    G7d, Ng23
  • Feature Type
    protein coding gene
  • IDs
    MGI:2388100
    NCBI Gene: 78376
  • Alliance
    gene page
  • Transcription Start Sites
    8 TSS
Location &
Maps
more
  • Sequence Map
    Chr17:35244935-35246992 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 17, 18.56 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2388100
 protein coding gene Chr17:35244935-35247600 (-)
129S1/SvImJ MGP_129S1SvImJ_G0023607
 protein coding gene Chr17:35158693-35160615 (-)
A/J MGP_AJ_G0023567
 protein coding gene Chr17:34000205-34002171 (-)
AKR/J MGP_AKRJ_G0023535
 protein coding gene Chr17:34469511-34473819 (-)
BALB/cJ MGP_BALBcJ_G0023573
 protein coding gene Chr17:34130237-34132496 (-)
C3H/HeJ MGP_C3HHeJ_G0023334
 protein coding gene Chr17:34864926-34868027 (-)
C57BL/6NJ MGP_C57BL6NJ_G0024012
 protein coding gene Chr17:36501308-36503215 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0021493
 protein coding gene Chr17:31766555-31768676 (-)
CAST/EiJ MGP_CASTEiJ_G0022831
 protein coding gene Chr17:34868308-34870307 (-)
CBA/J MGP_CBAJ_G0023312
 protein coding gene Chr17:38010529-38012430 (-)
DBA/2J MGP_DBA2J_G0023440
 protein coding gene Chr17:33318711-33321961 (-)
FVB/NJ MGP_FVBNJ_G0023407
 protein coding gene Chr17:33154884-33157171 (-)
LP/J MGP_LPJ_G0023517
 protein coding gene Chr17:35487487-35489312 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0023429
 protein coding gene Chr17:36940691-36944339 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0024057
 protein coding gene Chr17:34693732-34696428 (-)
PWK/PhJ MGP_PWKPhJ_G0022578
 protein coding gene Chr17:32150058-32153012 (-)
SPRET/EiJ MGP_SPRETEiJ_G0022398
 protein coding gene Chr17:32703516-32705504 (-)
WSB/EiJ MGP_WSBEiJ_G0022894
 protein coding gene Chr17:34806678-34809430 (-)



Homology
more
  • Human Ortholog
    SAPCD1, suppressor APC domain containing 1
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    SAPCD1, suppressor APC domain containing 1
  • Synonyms
    C6orf26, NG23
  • Links
    NCBI Gene ID: 401251
    neXtProt AC: NX_Q5SSQ6
    UniProt: Q5SSQ6

  • Chr Location
    6p21.33; chr6:31762656-31764850 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    6 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    710
  • Tissues
    4
  • cDNA Data
    5
  • Literature Summary
    2
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000036185 Ensembl Gene Model | MGI Sequence Detail 2058 C57BL/6J ±  kb
    transcript ENSMUST00000040151 Ensembl | MGI Sequence Detail 935 Not Applicable  
    polypeptide ENSMUSP00000047448 Ensembl | MGI Sequence Detail 146 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 6
      Genomic 1
      cDNA 5

      Microarray probesets 2
    References
    more
    • Summaries
      All 25
      Developmental Gene Expression 2
      Phenotypes 6
    • Earliest
      J:63110 Allcock RJ, et al., The mouse as a model for the effects of MHC genes on human disease. Immunol Today. 2000 Jul;21(7):328-32
    • Latest
      J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    04/23/2024
    MGI 6.23     		The Jackson Laboratory