Rab26os Gene Detail

Summary

• Symbol
  Rab26os
• Name
  RAB26, member RAS oncogene family, opposite strand
• Synonyms
  2610019E17Rik

• Feature Type
  antisense lncRNA gene
  BioType Conflict
  
• IDs
  MGI:1922864
  NCBI Gene: 75614
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr17:24747225-24747718 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, 12.40 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  70 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1922864	antisense lncRNA gene	Chr17:24747178-24747726 (+)
129S1/SvImJ	ENSMUSG00200054311	lncRNA gene	Chr17:20193696-20194218 (+)
A/J	ENSMUSG00195054692	lncRNA gene	Chr17:21212531-21213054 (+)
AKR/J	ENSMUSG00220028534	lncRNA gene	Chr17:20258913-20259433 (+)
BALB/cJ	ENSMUSG00180051898	lncRNA gene	Chr17:20486174-20486695 (+)
C3H/HeJ	ENSMUSG00175053702	lncRNA gene	Chr17:20244592-20245113 (+)
C57BL/6NJ	ENSMUSG00215054657	lncRNA gene	Chr17:20255183-20255701 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002999	antisense lncRNA gene	Chr17:20350426-20350889 (+)
CAST/EiJ	ENSTCUG00005050283	lncRNA gene	Chr17:20825476-20825998 (+)
CBA/J	ENSMUSG00210042046	lncRNA gene	Chr17:20083423-20083944 (+)
DBA/2J	ENSMUSG00185053246	lncRNA gene	Chr17:22300861-22301383 (+)
FVB/NJ	ENSMUSG00205053712	lncRNA gene	Chr17:20552550-20553072 (+)
JF1/MsJ	ENSUMUG00000057505	lncRNA gene	Chr17:21746979-21747497 (+)
LP/J	ENSMUSG00230055277	lncRNA gene	Chr17:23698358-23698880 (+)
NOD/ShiLtJ	ENSMUSG00190054449	lncRNA gene	Chr17:20189603-20190125 (+)
NZO/HlLtJ	ENSMUSG00225054857	lncRNA gene	Chr17:25619991-25620513 (+)
PWK/PhJ	ENSLUMG00010021104	lncRNA gene	Chr17:19656335-19656853 (+)
SPRET/EiJ	ENSMSPG00010050320	lncRNA gene	Chr17:20992530-20993052 (+)
WSB/EiJ	ENSIUOG00005051511	lncRNA gene	Chr17:20938510-20939031 (+)

Homology

• Gene Tree
  Rab26os
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype from 1 allele in 1 genetic background
  7 phenotype references
  

• All Mutations and Alleles
  92
• Endonuclease-mediated
  1
• Gene trapped
  91
• Find Mice (IMSR)
  0 strains or lines available

Mice homozygous for a null allele are viable with no obvious defects.

Expression

• Assay Results
  597
• cDNA Data
  6

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  27
• RefSeq
  1

• Ensembl
  ENSMUSG00000093565 (Evidence)
• NCBI Gene
  75614

Representative Sequences			Length	Strain/Species
genomic	75614	NCBI Gene Model | MGI Sequence Detail	494	C57BL/6J
transcript	NR_045289	RefSeq | MGI Sequence Detail	295	C57BL/6

Molecular
Reagents

• All nucleic 6

  cDNA 6

  
  

  Microarray probesets 1

References

• Summaries
  All 18

  Phenotypes 7
• Earliest
  J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
• Latest
  J:330639 Han X, et al., Mouse knockout models reveal largely dispensable but context-dependent functions of lncRNAs during development. J Mol Cell Biol. 2018 Apr 1;10(2):175-178

TSS for Rab26os:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr143043	Chr17:24747217-24747238 (+)	3 bp