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Tmem242 Gene Detail
Summary
  • Symbol
    Tmem242
  • Name
    transmembrane protein 242
  • Synonyms
    1110008A10Rik, 2310046K16Rik, 5730437N04Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1917794
    NCBI Gene: 70544
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr17:5461145-5490534 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 17, 3.16 cM, cytoband A1
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    175 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1917794
 protein coding gene Chr17:5461139-5490535 (-)
129S1/SvImJ MGP_129S1SvImJ_G0023104
 protein coding gene Chr17:2511540-2544876 (-)
A/J MGP_AJ_G0023074
 protein coding gene Chr17:2484705-2514124 (-)
AKR/J MGP_AKRJ_G0023040
 protein coding gene Chr17:2528859-2560129 (-)
BALB/cJ MGP_BALBcJ_G0023077
 protein coding gene Chr17:2451372-2480942 (-)
C3H/HeJ MGP_C3HHeJ_G0022837
 protein coding gene Chr17:2570709-2601483 (-)
C57BL/6NJ MGP_C57BL6NJ_G0023522
 protein coding gene Chr17:2675937-2709674 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0021022
 protein coding gene Chr17:2309122-2338191 (-)
CAST/EiJ MGP_CASTEiJ_G0022355
 protein coding gene Chr17:2584498-2614159 (-)
CBA/J MGP_CBAJ_G0022804
 protein coding gene Chr17:2778446-2819047 (-)
DBA/2J MGP_DBA2J_G0022939
 protein coding gene Chr17:2345133-2375057 (-)
FVB/NJ MGP_FVBNJ_G0022912
 protein coding gene Chr17:2387825-2417987 (-)
LP/J MGP_LPJ_G0023007
 protein coding gene Chr17:2642197-2678741 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0022933
 protein coding gene Chr17:2654794-2683703 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0023541
 protein coding gene Chr17:2565605-2596053 (-)
PWK/PhJ MGP_PWKPhJ_G0022099
 protein coding gene Chr17:2415924-2447109 (-)
SPRET/EiJ MGP_SPRETEiJ_G0021927
 protein coding gene Chr17:2512360-2540363 (-)
WSB/EiJ MGP_WSBEiJ_G0022405
 protein coding gene Chr17:2521861-2551605 (-)



Homology
more
  • Human Ortholog
    TMEM242, transmembrane protein 242
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    TMEM242, transmembrane protein 242
  • Synonyms
    BM033, C6orf35
  • Links
    NCBI Gene ID: 729515
    neXtProt AC: NX_Q9NWH2
    UniProt: Q9NWH2

  • Chr Location
    6q25.3; chr6:157289025-157323601 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    4
  • GO References
    3
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    63
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000004945 Ensembl Gene Model | MGI Sequence Detail 29390 C57BL/6J ±  kb
transcript ENSMUST00000005053 Ensembl | MGI Sequence Detail 948 Not Applicable  
polypeptide ENSMUSP00000005053 Ensembl | MGI Sequence Detail 140 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 63
    cDNA 63

    Microarray probesets 5
Other
Accession IDs
less
MGI:1915824, MGI:1916895
References
more
  • Summaries
    All 29
    Gene Ontology 3
    Phenotypes 6
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory