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Wdr27 Gene Detail
Summary
  • Symbol
    Wdr27
  • Name
    WD repeat domain 27
  • Synonyms
    0610012K18Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1918932
    NCBI Gene: 71682
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr17:15038781-15163420 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
  • Genetic Map
    Chromosome 17, 8.95 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    3602 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1918932
protein coding gene Chr17:15005092-15163540 (-)
129S1/SvImJ MGP_129S1SvImJ_G0023166
protein coding gene Chr17:12661458-12763886 (-)
A/J MGP_AJ_G0023132
protein coding gene Chr17:12464451-12580934 (-)
AKR/J MGP_AKRJ_G0023102
protein coding gene Chr17:12370538-12486404 (-)
BALB/cJ MGP_BALBcJ_G0023134
protein coding gene Chr17:12292881-12402962 (-)
C3H/HeJ MGP_C3HHeJ_G0022895
protein coding gene Chr17:12562635-12668647 (-)
C57BL/6NJ MGP_C57BL6NJ_G0023575
protein coding gene Chr17:13250646-13346430 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0021087
protein coding gene Chr17:10498063-10610422 (-)
CAST/EiJ MGP_CASTEiJ_G0022410
protein coding gene Chr17:12498026-12609118 (-)
CBA/J MGP_CBAJ_G0022869
protein coding gene Chr17:13632964-13757866 (-)
DBA/2J MGP_DBA2J_G0023002
protein coding gene Chr17:12189159-12292967 (-)
FVB/NJ MGP_FVBNJ_G0022970
protein coding gene Chr17:11983587-12094989 (-)
LP/J MGP_LPJ_G0023076
protein coding gene Chr17:12626117-12735506 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0022991
protein coding gene Chr17:13243056-13351153 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0023611
protein coding gene Chr17:12604163-12716938 (-)
PWK/PhJ MGP_PWKPhJ_G0022158
protein coding gene Chr17:11621664-11720018 (-)
SPRET/EiJ MGP_SPRETEiJ_G0021988
protein coding gene Chr17:11590622-11695800 (-)
WSB/EiJ MGP_WSBEiJ_G0022471
protein coding gene Chr17:12924797-13032438 (-)



Homology
more
  • Human Ortholog
    WDR27, WD repeat domain 27
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    WDR27, WD repeat domain 27
  • Links
    NCBI Gene ID: 253769
    neXtProt AC: NX_A2RRH5
    UniProt: A2RRH5

  • Chr Location
    6q27; chr6:169426420-169702067 (-)  GRCh38

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    11 phenotypes from 1 allele in 1 genetic background
    3 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
  • Comparison Matrix
  • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000046991 Ensembl Gene Model | MGI Sequence Detail 124640 C57BL/6J ±  kb
    transcript ENSMUST00000232147 Ensembl | MGI Sequence Detail 3147 Not Applicable  
    polypeptide ENSMUSP00000155992 Ensembl | MGI Sequence Detail 825 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 5
      cDNA 5

      Microarray probesets 2
    References
    more
    • Summaries
      All 19
      Gene Ontology 1
      Phenotypes 3
    • Earliest
      J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
    • Latest
      J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573

    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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    Funding Information
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    last database update
    09/24/2024
    MGI 6.24
    The Jackson Laboratory