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Gpank1 Gene Detail
Summary
  • Symbol
    Gpank1
  • Name
    G patch domain and ankyrin repeats 1
  • Synonyms
    Bat4, D17H6S54E, G5
  • Feature Type
    protein coding gene
  • IDs
    MGI:2148975
    NCBI Gene: 81845
  • Alliance
    gene page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr17:35340472-35343791 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 17, 18.59 cM
  • Mapping Data
    7 experiments
Strain
Comparison
more
  • Strain Annotations
    17
  • RFLP
    1
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2148975
 protein coding gene Chr17:35340431-35343791 (+)
129S1/SvImJ MGP_129S1SvImJ_G0023620
 protein coding gene Chr17:35262641-35266228 (+)
A/J MGP_AJ_G0023580
 protein coding gene Chr17:34095150-34098122 (+)
AKR/J MGP_AKRJ_G0023548
 protein coding gene Chr17:34571446-34573353 (+)
BALB/cJ MGP_BALBcJ_G0023586
 protein coding gene Chr17:34233798-34237101 (+)
C3H/HeJ MGP_C3HHeJ_G0023347
 protein coding gene Chr17:34970981-34975130 (+)
C57BL/6NJ MGP_C57BL6NJ_G0024025
 protein coding gene Chr17:36603500-36608493 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0021506
 protein coding gene Chr17:31863665-31867216 (+)
CAST/EiJ MGP_CASTEiJ_G0022843
 protein coding gene Chr17:34967136-34971404 (+)
CBA/J no annotation
DBA/2J MGP_DBA2J_G0023453
 protein coding gene Chr17:33419011-33419693 (+)
FVB/NJ MGP_FVBNJ_G0023420
 protein coding gene Chr17:33256977-33260907 (+)
LP/J MGP_LPJ_G0023530
 protein coding gene Chr17:35592050-35595393 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0023442
 protein coding gene Chr17:37044568-37047896 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0024070
 protein coding gene Chr17:34789897-34794862 (+)
PWK/PhJ MGP_PWKPhJ_G0022591
 protein coding gene Chr17:32252170-32255498 (+)
SPRET/EiJ MGP_SPRETEiJ_G0022411
 protein coding gene Chr17:32805160-32808423 (+)
WSB/EiJ MGP_WSBEiJ_G0022907
 protein coding gene Chr17:34909984-34914725 (+)



Homology
more
  • Human Ortholog
    GPANK1, G-patch domain and ankyrin repeats 1
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    GPANK1, G-patch domain and ankyrin repeats 1
  • Synonyms
    ANKRD59, BAT4, D6S54E, G5, GPATCH10
  • Links
    NCBI Gene ID: 7918
    neXtProt AC: NX_O95872
    UniProt: O95872

  • Chr Location
    6p21.33; chr6:31661228-31666283 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    3 phenotypes from 1 allele in 1 genetic background
    8 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
    2
  • GO References
    2
Molecular Function

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    739
  • Tissues
    33
  • cDNA Data
    10
  • Literature Summary
    4
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 81845 NCBI Gene Model | MGI Sequence Detail 3320 C57BL/6J ±  kb
transcript NM_001410202 RefSeq | MGI Sequence Detail 1542 ZRU/MplStud  
polypeptide Q61858 UniProt | EBI | MGI Sequence Detail 372 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 31
    Genomic 16
    cDNA 13
    Primer pair 2

    Microarray probesets 7
Other
Accession IDs
less
MGD-MRK-1501, MGD-MRK-1509, MGD-MRK-16251, MGI:99477
References
more
  • Summaries
    All 41
    Developmental Gene Expression 4
    Gene Ontology 2
    Phenotypes 8
  • Earliest
    J:1314 Lafuse WP, et al., PFGE mapping and RFLP analysis of the S/D region of the mouse H-2 complex. Immunogenetics. 1992;36(2):110-6
  • Latest
    J:239479 Arora H, et al., Prokineticin receptor 1 is required for mesenchymal-epithelial transition in kidney development. FASEB J. 2016 Aug;30(8):2733-40
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory