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5031415H12Rik Gene Detail
Summary
  • Symbol
    5031415H12Rik
  • Name
    RIKEN cDNA 5031415H12 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1923234
    NCBI Gene: 75984
  • Alliance
    genome feature page
  • Transcription Start Sites
    7 TSS
Location &
Maps
more
  • Sequence Map
    Chr17:71052324-71062577 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 17, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    357 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1923234
 lncRNA gene Chr17:71052324-71062577 (-)
129S1/SvImJ ENSMUSG00200039757
 lncRNA gene Chr17:66379892-66390073 (-)
A/J ENSMUSG00195019926
 lncRNA gene Chr17:67718222-67728412 (-)
AKR/J ENSMUSG00220019159
 lncRNA gene Chr17:66765810-66776291 (-)
BALB/cJ ENSMUSG00180021891
 lncRNA gene Chr17:67454429-67464622 (-)
C3H/HeJ ENSMUSG00175032424
 lncRNA gene Chr17:66767599-66777791 (-)
C57BL/6NJ ENSMUSG00215033755
 lncRNA gene Chr17:66468044-66478442 (-)
CAROLI/EiJ no annotation
CAST/EiJ ENSTCUG00005028077
 lncRNA gene Chr17:67317069-67327248 (-)
CBA/J ENSMUSG00210031429
 lncRNA gene Chr17:66579644-66589837 (-)
DBA/2J ENSMUSG00185023368
 lncRNA gene Chr17:69412733-69422929 (-)
FVB/NJ ENSMUSG00205019709
 lncRNA gene Chr17:67239413-67249671 (-)
JF1/MsJ ENSUMUG00000041974
 lncRNA gene Chr17:69081014-69091297 (-)
LP/J ENSMUSG00230016645
 lncRNA gene Chr17:70385277-70395459 (-)
NOD/ShiLtJ ENSMUSG00190039431
 lncRNA gene Chr17:66528870-66539333 (-)
NZO/HlLtJ ENSMUSG00225029070
 lncRNA gene Chr17:72664534-72674719 (-)
PWK/PhJ ENSLUMG00010031557
 lncRNA gene Chr17:66313560-66323789 (-)
SPRET/EiJ ENSMSPG00010017918
 lncRNA gene Chr17:66684534-66695447 (-)
WSB/EiJ ENSIUOG00005034086
 lncRNA gene Chr17:67440441-67450725 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
  • cDNA Data
    3
Sequences &
Gene Models
less
  • All Sequences
    23
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000097282 Ensembl Gene Model | MGI Sequence Detail 10254 C57BL/6J ±  kb
transcript ENSMUST00000181546 Ensembl | MGI Sequence Detail 2481 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3

    Microarray probesets 2
References
more
  • Summaries
    All 10
    Phenotypes 1
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory