Mapping Data

Experiment

• Experiment
  TEXT-Physical Mapping
• Chromosome
  15
• Reference
  J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
• ID
  MGI:2449332

Genes

Gene	Assay Type
Lypd2	assembly
Snhg18	assembly
Arfgap3	assembly
Eif3l	assembly
Ankrd33b	assembly
Grhl2	assembly
Cyb5r3	assembly
Sharpin	assembly
Cyrib	assembly
1100001I12Rik	assembly
Gpihbp1	assembly
Fkbp11	assembly
Sp1	assembly
Trmu	assembly
Plxnb2	assembly
St13	assembly
Poldip3	assembly
Atf7	assembly
Drosha	assembly
Lmbr1l	assembly
1110013H19Rik	assembly
Ywhaz	assembly
Nsmce2	assembly
Rrp7a	assembly
Cby1	assembly
Pdzrn4	assembly
Letmd1	assembly
Prr13	assembly
Nadk2	assembly
Derl1	assembly
Grina	assembly
1110025M09Rik	assembly
Ago2	assembly
Samm50	assembly
Zftraf1	assembly
Rabl2	assembly
C030006K11Rik	assembly
Ppp6r2	assembly
Zfp740	assembly
Mgat3	assembly
Exosc4	assembly
Ankrd46	assembly
Pycr3	assembly
Prickle1	assembly
1110059G02Rik	assembly
Brd1	assembly
Scaf11	assembly
Pphln1	assembly
Brix1	assembly
Maf1	assembly
Cpq	assembly
Cpne8	assembly
Nptxr	assembly
Krt80	assembly
Josd1	assembly
Cyp2d26	assembly
Gpt	assembly
Cyp2d13	assembly
Cyp2d40	assembly
Selenoo	assembly
Smim45	assembly
Cpne8	assembly
Zfp707	assembly
Smdt1	assembly
Pphln1	assembly
Slc39a4	assembly
Trmu	assembly
Pdxp	assembly
1700001L05Rik	assembly
Gtsf1	assembly
Syce3	assembly
Rai14	assembly
4930556M19Rik	assembly
Zbed4	assembly
1700010B13Rik	assembly
Fam135b	assembly
Oplah	assembly
1700010G06Rik	assembly
Utp23	assembly
Krt88	assembly
1700012I11Rik	assembly
1700015H07Rik	assembly
Mroh4	assembly
Ttll8	assembly
Rai14	assembly
1700022A22Rik	assembly
1700025B11Rik	assembly
Atp6v1c1	assembly
H1f7	assembly
Eef1d	assembly
1700027A07Rik	assembly
Dennd6b	assembly
Capsl	assembly
Fam186a	assembly
Nup50	assembly
1700031M16Rik	assembly
1700040F17Rik	assembly
1700041B01Rik	assembly
1700047G03Rik	assembly
Cimip4	assembly
1700074I03Rik	assembly
1700082O11Rik	assembly
1700084J12Rik	assembly
Spatc1	assembly
1700085D07Rik	assembly
Tssk5	assembly
Fbxo4	assembly
1700109K24Rik	assembly
1700120C14Rik	assembly
1700121M21Rik	assembly
Arid2	assembly
1700129L04Rik	assembly
Calcoco1	assembly
Galnt6os	assembly
Sgsm3	assembly
Retreg1	assembly
1810021B22Rik	assembly
Arfgap3	assembly
Rhebl1	assembly
Gsdmd	assembly
Med30	assembly
Shisal1	assembly
Vps13b	assembly
Trappc9	assembly
Eny2	assembly
Polr2f	assembly
Cela1	assembly
Cimap1b	assembly
Dscc1	assembly
Ly6m	assembly
Prr13	assembly
Cdpf1	assembly
Slurp2	assembly
Krt76	assembly
Mtss1	assembly
Mfsd3	assembly
Smgc	assembly
Tab1	assembly
Cmbl	assembly
Apol9b	assembly
Cox14	assembly
Rapgef3	assembly
Gpt	assembly
2310026G15Rik	assembly
Tef	assembly
Krt78	assembly
Kansl2	assembly
Pou6f1	assembly
Krt80	assembly
Vps13b	assembly
Ccdc134	assembly
Rpap3	assembly
2310043O21Rik	assembly
Ago2	assembly
Col22a1	assembly
2310068J16Rik	assembly
2310069G16Rik	assembly
Apol6	assembly
Tatdn1	assembly
Cers5	assembly
Ly6k	assembly
Ccdc166	assembly
Cplane1	assembly
Ttc33	assembly
Puf60	assembly
Ntaq1	assembly
Cyb5r3	assembly
Cyth4	assembly
Rps19bp1	assembly
Med30	assembly
Dscc1	assembly
Ift27	assembly
Ddx17	assembly
Cenpm	assembly
Rspo2	assembly
2610028H08Rik	assembly
Zfp623	assembly
Tmem65	assembly
Cpq	assembly
2610037D02Rik	assembly
Slc25a32	assembly
Mtdh	assembly
Prpf40b	assembly
Atad2	assembly
Sbf1	assembly
Scaf11	assembly
Ncaph2	assembly
Kcnv1	assembly
Fmnl3	assembly
Pycr3	assembly
Zcrb1	assembly
Tnrc6b	assembly
2810001A02Rik	assembly
C1qtnf6	assembly
2810039B14Rik	assembly
2810405K22Rik	assembly
Chrac1	assembly
Tcf20	assembly
Tonsl	assembly
Dnajc22	assembly
Puf60	assembly
Baalc	assembly
Rbfox2	assembly
Ccnt1	assembly
Ttc33	assembly
Faim2	assembly
Trappc9	assembly
Kctd17	assembly
2900019E01Rik	assembly
2900046L07Rik	assembly
Top1mt	assembly
2900056L01Rik	assembly
Ano6	assembly
2900072G19Rik	assembly
Norad	assembly
Pus7l	assembly
4930578M01Rik	assembly
Ankrd33b	assembly
3100002H20Rik	assembly
St13	assembly
Rpl37	assembly
3110006I21Rik	assembly
Zfp706	assembly
Septin3	assembly
Ly6k	assembly
Arhgap8	assembly
3110045A19Rik	assembly
3110047M12Rik	assembly
Fam118a	assembly
3110073H01Rik	assembly
3110076C19Rik	assembly
Ddx23	assembly
Tmt1a	assembly
Lima1	assembly
Arid2	assembly
Ubr5	assembly
Snx31	assembly
Trmt12	assembly
Trappc9	assembly
Deptor	assembly
Taf2	assembly
Cplane1	assembly
L3mbtl2	assembly
Tmem184b	assembly
4833412C15Rik	assembly
Dcstamp	assembly
Sdc2	assembly
4833417J16Rik	assembly
Wdr70	assembly
4833422M21Rik	assembly
Pnpla5	assembly
Nfam1	assembly
Rictor	assembly
Ddx23	assembly
Lrrk2	assembly
4921515E04Rik	assembly
4921515G04Rik	assembly
Nipbl	assembly
Nckap5los	assembly
4930523O13Rik	assembly
Emc2	assembly
Dap	assembly
Nudcd1	assembly
Ttc23l	assembly
4930402D18Rik	assembly
Gga1	assembly
4930413F20Rik	assembly
1700031M16Rik	assembly
Spmip11	assembly
4930430F21Rik	assembly
Tmem65	assembly
4930445E18Rik	assembly
4930445N06Rik	assembly
4930447A16Rik	assembly
4930449C09Rik	assembly
Mroh2b	assembly
Dnajc21	assembly
4930465K09Rik	assembly
Zfp572	assembly
4930478E11Rik	assembly
4930478M13Rik	assembly
4930483J18Rik	assembly
4930500E03Rik	assembly
Csmd3	assembly
4930504C09Rik	assembly
4930505O19Rik	assembly
4930513L16Rik	assembly
4930518I17Rik	assembly
Wbp2nl	assembly
4930523O13Rik	assembly
Fbxo43	assembly
4930540I17Rik	assembly
4930543I03Rik	assembly
4930544F09Rik	assembly
4930548G14Rik	assembly
4930551A22Rik	assembly
4930555K19Rik	assembly
Rnf139	assembly
4930556M19Rik	assembly
Bcdin3d	assembly
4930557F08Rik	assembly
4930563H03Rik	assembly
Nckap1l	assembly
4930570B17Rik	assembly
Slc48a1	assembly
Them6	assembly
4930573C08Rik	assembly
4930578M01Rik	assembly
Ribc2	assembly
4930588D02Rik	assembly
4930588J15Rik	assembly
4930592A05Rik	assembly
Efcab6	assembly
Mei1	assembly
Pop1	assembly
4932442A14Rik	assembly
4833422M21Rik	assembly
Iqank1	assembly
4933412E24Rik	assembly
1700022A22Rik	assembly
4933414I06Rik	assembly
4933416A02Rik	assembly
Nipbl	assembly
4933423N12Rik	assembly
1700109K24Rik	assembly
Gsdmcl-ps	assembly
4933427E11Rik	assembly
4933428L01Rik	assembly
Fam227a	assembly
4933433M23Rik	assembly
4933438A12Rik	assembly
Polr3h	assembly
5031439G07Rik	assembly
Slc38a2	assembly
5033430J17Rik	assembly
5330433J24Rik	assembly
5330439K02Rik	assembly
Arf3	assembly
5430434G16Rik	assembly
5430437J10Rik	assembly
5530400N10Rik	assembly
5730407I07Rik	assembly
Sybu	assembly
Col14a1	assembly
5730414N17Rik	assembly
Dab2	assembly
Trabd	assembly
5730521K06Rik	assembly
Ankrd33b	assembly
5730585A16Rik	assembly
Creld2	assembly
5830426I08Rik	assembly
5830427D02Rik	assembly
5830427D03Rik	assembly
Hdac7	assembly
5830453K13Rik	assembly
Cyth4	assembly
Rictor	assembly
Smim41	assembly
6030458C11Rik	assembly
BC024139	assembly
6330417A16Rik	assembly
Ttll1	assembly
Sp7	assembly
Trio	assembly
7530414M10Rik	assembly
8030476L19Rik	assembly
Irak4	assembly
Ppp6r2	assembly
8430418B16Rik	assembly
8430426J06Rik	assembly
9030408N04Rik	assembly
9030419F21Rik	assembly
Zfp251	assembly
9130002K18Rik	assembly
9130004J05Rik	assembly
Sema5a	assembly
Naprt	assembly
9130401M01Rik	assembly
Deptor	assembly
Arfgap3	assembly
9230109A22Rik	assembly
9330115C17Rik	assembly
9330154K18Rik	assembly
Nipal2	assembly
Rapgef3	assembly
Irak4	assembly
9430014N10Rik	assembly
Atg101	assembly
9430031J08Rik	assembly
Atf7	assembly
9430068D22Rik	assembly
9430069I07Rik	assembly
9430087N24Rik	assembly
9430091N11Rik	assembly
9630009A06Rik	assembly
Apol8	assembly
9930014A18Rik	assembly
Zfp641	assembly
9930017N22Rik	assembly
Lmbrd2	assembly
Dnajc21	assembly
A030007N12Rik	assembly
A230048O21Rik	assembly
Lifr	assembly
A330009N23Rik	assembly
Nell2	assembly
A430088I17Rik	assembly
Gpr20	assembly
Trib1	assembly
Scube1	assembly
A630065K11Rik	assembly
Phf21b	assembly
A730060N03Rik	assembly
Tnrc6b	assembly
Rnd1	assembly
Cdh10	assembly
Sybu	assembly
Samd12	assembly
A930001M01Rik	assembly
Atpsckmt	assembly
Ankrd33	assembly
Pdzd2	assembly
A930027H12Rik	assembly
A930031G03Rik	assembly
Ano6	assembly
Tigd5	assembly
Aard	assembly
Abcd2	assembly
Acvrl1	assembly
Adcy6	assembly
Trps1	assembly
Hoxc5	assembly
Prkaa1	assembly
Dip2b	assembly
Amigo2	assembly
Ccdc65	assembly
Dennd3	assembly
Scube1	assembly
Asic1	assembly
Washc5	assembly
Miox	assembly
Amacr	assembly
Arfgap3	assembly
Slurp1	assembly
Arsa	assembly
Asb8	assembly
Atf1	assembly
Atp5mc2	assembly
Cacng2	assembly
Slc45a4	assembly
Mrtfa	assembly
Plcxd3	assembly
B130021B11Rik	assembly
B130063F10Rik	assembly
Cacng2	assembly
Ppp6r2	assembly
Sbf1	assembly
Cdh18	assembly
B230362B09Rik	assembly
Sun2	assembly
Tmem74	assembly
Zfpm2	assembly
Slc1a3	assembly
B430209F14Rik	assembly
Npr3	assembly
Septin3	assembly
Fyb1	assembly
Tmem117	assembly
Basp1	assembly
Efr3a	assembly
D730005E14Rik	assembly
Cdh10	assembly
C030006K11Rik	assembly
Cdh10	assembly
Prr5	assembly
Kcnh3	assembly
C030047K22Rik	assembly
Atf7	assembly
4930556M19Rik	assembly
Ranbp3l	assembly
C130064B19Rik	assembly
Abra	assembly
Ccn3	assembly
Fam118a	assembly
C230079E05Rik	assembly
Spef2	assembly
Vps13b	assembly
C330013E15Rik	assembly
Kmt2d	assembly
C430045I18Rik	assembly
Scn8a	assembly
Mtmr12	assembly
C730034F03Rik	assembly
Ankrd54	assembly
Slc30a8	assembly
Lrp12	assembly
Pheta2	assembly
Efr3a	assembly
Zfr	assembly
Card10	assembly
Cbx5	assembly
Cct5	assembly
Cdc42ep1	assembly
Chkb	assembly
Chrac1	assembly
Col14a1	assembly
Copz1	assembly
C1qtnf3	assembly
Cox6c	assembly
Csad	assembly
Csnk1e	assembly
Cthrc1	assembly
Cyc1	assembly
Zftraf1	assembly
Cyp2d22	assembly
Ncald	assembly
Aaas	assembly
Efr3a	assembly
D030074K08Rik	assembly
Mtss1	assembly
Hoxc8	assembly
H1f0	assembly
D130051D11Rik	assembly
Tfcp2	assembly
Fbxl7	assembly
Tnrc6b	assembly
Mroh1	assembly
Cerk	assembly
Larp4	assembly
Utp23	assembly
Rictor	assembly
Lrrk2	assembly
Ly6g6g	assembly
Vps28	assembly
D730005E14Rik	assembly
D730044K07Rik	assembly
Nup155	assembly
Dnajb7	assembly
Dpys	assembly
Myh9	assembly
Kcns2	assembly
E130014H10Rik	assembly
Phf20l1	assembly
Troap	assembly
Lrrc14	assembly
Tspyl5	assembly
E330019L11Rik	assembly
E330033B04Rik	assembly
Senp1	assembly
Xpnpep3	assembly
Ebag9	assembly
Eif3h	assembly
Eif3d	assembly
Marchf6	assembly
Fbln1	assembly
Fbxl6	assembly
Fbxo32	assembly
Fyb1	assembly
Galnt6	assembly
Gga1	assembly
Golph3	assembly
Gpaa1	assembly
Gtpbp1	assembly
Gml2	assembly
Rida	assembly
Krt71	assembly
Laptm4b	assembly
Lgals2	assembly
Dnaaf11	assembly
Ly6h	assembly
Lynx1	assembly
Map3k12	assembly
Mapk12	assembly
Mapk8ip2	assembly
Matn2	assembly
Grap2	assembly
Mrpl13	assembly
Myg1	assembly
Ndrg1	assembly
Ndufa6	assembly
Ndufb9	assembly
Nptxr	assembly
Nr4a1	assembly
Azin1	assembly
Oxct1	assembly
Oxr1	assembly
Pabpc1	assembly
Pacsin2	assembly
Parvg	assembly
Pde1b	assembly
Pdzd2	assembly
Pfkm	assembly
Pmm1	assembly
Ppp1r1a	assembly
Pick1	assembly
Ptp4a3	assembly
Adgrb1	assembly
Rac2	assembly
Racgap1	assembly
Rad21	assembly
Rbx1	assembly
Recql4	assembly
Rims2	assembly
Rpl8	assembly
Sub1	assembly
Rxfp3	assembly
Atxn10	assembly
Spats2	assembly
Serhl	assembly
Shank3	assembly
St3gal1	assembly
Skp2	assembly
Slc25a17	assembly
Slc38a4	assembly
Slc4a8	assembly
Smug1	assembly
Spag1	assembly
Spn-ps	assembly
Snu13	assembly
Stk3	assembly
Sult4a1	assembly
Syngr1	assembly
Klf10	assembly
Tmprss6	assembly
Tnfrsf13c	assembly
Tob2	assembly
Txn2	assembly
Upk3a	assembly
Vps28	assembly
Yaf2	assembly
Zfr	assembly
Zhx1	assembly
Il7r	assembly
Osmr	assembly
Prlr	assembly
Selenop	assembly
Ptger4	assembly
Tars1	assembly
Dab2	assembly
Slc45a2	assembly
Npr3	assembly
Zfp622	assembly
Myo10	assembly
Sdc2	assembly
Fzd6	assembly
Osr2	assembly
Angpt1	assembly
Ank	assembly
Rpl30	assembly
Eif3e	assembly
Sema5a	assembly
Anxa13	assembly
Has2	assembly
Myc	assembly
Pvt1	assembly
Khdrbs3	assembly
Oc90	assembly
Sla	assembly
Ccn4	assembly
Ly6e	assembly
Ptk2	assembly
Ly6c1	assembly
Jrk	assembly
Bop1	assembly
Hsf1	assembly
Atf4	assembly
Il2rb	assembly
Rangap1	assembly
Scx	assembly
Foxred2	assembly
Plec	assembly
Hgh1	assembly
Slc52a2	assembly
Commd5	assembly
Lgals1	assembly
Ppp1r16a	assembly
Tst	assembly
Pvalb	assembly
Adsl	assembly
Nptxr	assembly
Cbx7	assembly
Dnal4	assembly
Mgat3	assembly
Gtse1	assembly
1700088E04Rik	assembly
Micall1	assembly
Triobp	assembly
Gcat	assembly
Sox10	assembly
Desi1	assembly
Tef	assembly
Dgat1	assembly
Gfus	assembly
Dmc1	assembly
Xrcc6	assembly
Srebf2	assembly
Acr	assembly
Ppara	assembly
Nup50	assembly
Ncaph2	assembly
Tymp	assembly
Col2a1	assembly
Cntn1	assembly
Kif21a	assembly
Senp1	assembly
Aqp2	assembly
Aqp5	assembly
Cela1	assembly
Gpd1	assembly
Smarcd1	assembly
Tfcp2	assembly
Tmbim6	assembly
Aqp6	assembly
Dhh	assembly
Hoxc9	assembly
Krt7	assembly
Krt75	assembly
Krt6b	assembly
Krt6a	assembly
Krt5	assembly
Krt1	assembly
Slc11a2	assembly
Dazap2	assembly
Lima1	assembly
Tuba1a	assembly
Pcbp2	assembly
Pfdn5	assembly
Glycam1	assembly

Notes

• Reference
  The markers listed below for this experiment were mapped to mouse chromosomes based on sequence similarities to the Mouse Genome Sequencing Consortium (MGSC V3) assembly. Chromosomal locations were obtained from the Genome Exploration Research Group of the RIKEN Institute of Physical and Chemical Research in Japan. Where multiple RIKEN clones were associated to the same marker by sequence similarity clustering, mapping data were loaded only if all RIKEN clones from the same cluster mapped to the same mouse chromosome.