C730034F03Rik Gene Detail

Summary

• Symbol
  C730034F03Rik
• Name
  RIKEN cDNA C730034F03 gene
• Synonyms
  lncRNA-CHKB-DT

• Feature Type
  lncRNA gene
• IDs
  MGI:2441921
  NCBI Gene: 105246016
• Alliance
  genome feature page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr15:89314218-89331082 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, 44.90 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  467 from dbSNP Build 142
• Strain Annotations
  31

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_2441921	lncRNA gene	Chr15:89313682-89331590 (+)
129S1/SvImJ	ENSMUSG00200034652	protein coding gene	Chr15:86461335-86473305 (+)
129S1/SvImJ	ENSMUSG00200035726	lncRNA gene	Chr15:86465711-86466990 (+)
A/J	ENSMUSG00195020347	lncRNA gene	Chr15:86387389-86388668 (+)
A/J	ENSMUSG00195019782	protein coding gene	Chr15:86383013-86394991 (+)
AKR/J	ENSMUSG00220031590	lncRNA gene	Chr15:86417972-86419251 (+)
AKR/J	ENSMUSG00220029221	protein coding gene	Chr15:86413596-86432676 (+)
BALB/cJ	ENSMUSG00180015308	lncRNA gene	Chr15:86241194-86242473 (+)
BALB/cJ	ENSMUSG00180014174	protein coding gene	Chr15:86236818-86248800 (+)
C3H/HeJ	ENSMUSG00175029386	lncRNA gene	Chr15:86573994-86575273 (+)
C3H/HeJ	ENSMUSG00175025249	protein coding gene	Chr15:86569618-86581603 (+)
C57BL/6NJ	ENSMUSG00215020832	protein coding gene	Chr15:86330366-86342342 (+)
C57BL/6NJ	ENSMUSG00215030414	lncRNA gene	Chr15:86334742-86336021 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0020171	protein coding gene	Chr15:83384388-83385875 (+)
CAST/EiJ	ENSTCUG00005031571	lncRNA gene	Chr15:85839324-85840604 (+)
CBA/J	ENSMUSG00210012999	protein coding gene	Chr15:86339068-86351049 (+)
CBA/J	ENSMUSG00210013174	lncRNA gene	Chr15:86343444-86344723 (+)
DBA/2J	ENSMUSG00185021170	protein coding gene	Chr15:86350986-86362960 (+)
DBA/2J	ENSMUSG00185022411	lncRNA gene	Chr15:86355362-86356641 (+)
FVB/NJ	ENSMUSG00205031368	protein coding gene	Chr15:86111717-86123695 (+)
FVB/NJ	ENSMUSG00205038297	lncRNA gene	Chr15:86116094-86117373 (+)
JF1/MsJ	ENSUMUG00000042666	lncRNA gene	Chr15:85923536-85924818 (+)
LP/J	ENSMUSG00230042949	protein coding gene	Chr15:89701520-89713490 (+)
LP/J	ENSMUSG00230045425	lncRNA gene	Chr15:89705896-89707175 (+)
NOD/ShiLtJ	ENSMUSG00190029060	lncRNA gene	Chr15:86359844-86361123 (+)
NOD/ShiLtJ	ENSMUSG00190028022	protein coding gene	Chr15:86355468-86374544 (+)
NZO/HlLtJ	ENSMUSG00225051034	lncRNA gene	Chr15:90022457-90023736 (+)
NZO/HlLtJ	ENSMUSG00225049731	protein coding gene	Chr15:90021225-90023727 (+)
PWK/PhJ	ENSLUMG00010034191	lncRNA gene	Chr15:86076343-86077625 (+)
SPRET/EiJ	ENSMSPG00010014857	lncRNA gene	Chr15:87775474-87776755 (+)
WSB/EiJ	ENSIUOG00005011601	lncRNA gene	Chr15:86449897-86451176 (+)

Homology

• Gene Tree
  C730034F03Rik
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  16 phenotype references
  

• All Mutations and Alleles
  1
• Radiation induced
  1
• Genomic Mutations
  1 involving C730034F03Rik
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  4

Tissue x Stage Matrix

• Other Mouse Links
  Allen Institute
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  45
• RefSeq
  3
• UniProt
  1

• Ensembl
  ENSMUSG00000079242 (Evidence)
• NCBI Gene
  105246016

Representative Sequences			Length	Strain/Species
genomic	105246016	NCBI Gene Model | MGI Sequence Detail	16865	C57BL/6J
transcript	AK083297	GenBank | ENA | DDBJ | MGI Sequence Detail	3284	C57BL/6J
polypeptide	Q8BGL5	UniProt | EBI | MGI Sequence Detail	111	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 6

  Genomic 2

  cDNA 4

  
  

  Microarray probesets 2

References

• Summaries
  All 30

  Phenotypes 16
• Earliest
  J:7688 Lane PW, et al., Association of megacolon with a new dominant spotting gene (Dom) in the mouse. J Hered. 1984 Nov-Dec;75(6):435-9
• Latest
  J:387680 Ahn B, et al., Disorganization of Transcriptional Regulation and Alteration of Keratin Family Gene Expression in Hairy Ear Mice. Genes (Basel). 2026 Jan 31;17(2)

TSS for C730034F03Rik:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr132672	Chr15:89313763-89313782 (+)	-445 bp
Tssr132673	Chr15:89314262-89314267 (+)	47 bp