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1700040F17Rik Gene Detail
Summary
  • Symbol
    1700040F17Rik
  • Name
    RIKEN cDNA 1700040F17 gene
Location &
Maps
more
  • Sequence Map
    Chr15:55299506-55302416 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 15, 21.96 cM, cytoband D2
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    189 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1920584
 lncRNA gene Chr15:55299506-55302416 (-)
129S1/SvImJ ENSMUSG00200031392
 lncRNA gene Chr15:52274946-52277851 (-)
A/J ENSMUSG00195006245
 lncRNA gene Chr15:52312846-52315751 (-)
AKR/J ENSMUSG00220021646
 lncRNA gene Chr15:52320438-52323343 (-)
BALB/cJ ENSMUSG00180009184
 lncRNA gene Chr15:52258121-52261026 (-)
C3H/HeJ ENSMUSG00175004841
 lncRNA gene Chr15:52516683-52519588 (-)
C57BL/6NJ ENSMUSG00215012090
 lncRNA gene Chr15:52256008-52258913 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0002913
 antisense lncRNA gene Chr15:49593944-49596834 (-)
CAST/EiJ ENSTCUG00005007207
 lncRNA gene Chr15:52146518-52149415 (-)
CBA/J ENSMUSG00210007198
 lncRNA gene Chr15:52343885-52346790 (-)
DBA/2J ENSMUSG00185026904
 lncRNA gene Chr15:52321391-52324296 (-)
FVB/NJ ENSMUSG00205006865
 lncRNA gene Chr15:52166913-52169818 (-)
JF1/MsJ ENSUMUG00000031973
 lncRNA gene Chr15:52155569-52158466 (-)
LP/J ENSMUSG00230008599
 lncRNA gene Chr15:55636435-55639340 (-)
NOD/ShiLtJ ENSMUSG00190017181
 lncRNA gene Chr15:52317354-52320259 (-)
NZO/HlLtJ ENSMUSG00225028748
 lncRNA gene Chr15:55963558-55966463 (-)
PWK/PhJ ENSLUMG00010027891
 lncRNA gene Chr15:52385106-52388003 (-)
SPRET/EiJ ENSMSPG00010024727
 lncRNA gene Chr15:53459944-53462847 (-)
WSB/EiJ ENSIUOG00005006409
 lncRNA gene Chr15:52343209-52346114 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
  • cDNA Data
    2
Sequences &
Gene Models
less
  • All Sequences
    23
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000101568 Ensembl Gene Model | MGI Sequence Detail 2911 C57BL/6J ±  kb
transcript ENSMUST00000187158 Ensembl | MGI Sequence Detail 822 Not Applicable  
polypeptide Q9D9P0 UniProt | EBI | MGI Sequence Detail 115 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR040433 Spermatid nuclear transition protein
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2

    Microarray probesets 1
References
more
  • Summaries
    All 16
    Phenotypes 5
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory