4930449C09Rik Gene Detail

Summary

• Symbol
  4930449C09Rik
• Name
  RIKEN cDNA 4930449C09 gene

• Feature Type
  lncRNA gene
• IDs
  MGI:1921244
  NCBI Gene: 73994
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr15:63590197-63609485 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, 27.69 cM, cytoband D1
• Mapping Data
  2 experiments

Strain
Comparison

• SNPs within 2kb
  759 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1921244	lncRNA gene	Chr15:63589087-63645316 (+)
129S1/SvImJ	ENSMUSG00200030841	lncRNA gene	Chr15:60622483-60642352 (+)
A/J	ENSMUSG00195006386	lncRNA gene	Chr15:60646098-60665910 (+)
AKR/J	ENSMUSG00220021904	lncRNA gene	Chr15:60562544-60582365 (+)
BALB/cJ	ENSMUSG00180009563	lncRNA gene	Chr15:60555235-60575034 (+)
C3H/HeJ	ENSMUSG00175005181	lncRNA gene	Chr15:60846677-60866468 (+)
C57BL/6NJ	ENSMUSG00215012445	lncRNA gene	Chr15:60573352-60593220 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005006917	lncRNA gene	Chr15:60397919-60417921 (+)
CBA/J	ENSMUSG00210007170	lncRNA gene	Chr15:60678309-60698106 (+)
DBA/2J	ENSMUSG00185026690	lncRNA gene	Chr15:60613579-60633433 (+)
FVB/NJ	ENSMUSG00205007317	lncRNA gene	Chr15:60372366-60392229 (+)
JF1/MsJ	ENSUMUG00000031731	lncRNA gene	Chr15:60385546-60405536 (+)
LP/J	ENSMUSG00230025556	lncRNA gene	Chr15:63949206-63969071 (+)
NOD/ShiLtJ	ENSMUSG00190017146	lncRNA gene	Chr15:60661916-60681782 (+)
NZO/HlLtJ	ENSMUSG00225027298	lncRNA gene	Chr15:64231773-64251632 (+)
PWK/PhJ	ENSLUMG00010029088	lncRNA gene	Chr15:60694915-60715893 (+)
SPRET/EiJ	ENSMSPG00010027464	lncRNA gene	Chr15:62035290-62057663 (+)
WSB/EiJ	ENSIUOG00005006655	lncRNA gene	Chr15:60672108-60691893 (+)

Homology

• Gene Tree
  4930449C09Rik
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  27 phenotype references
  

• All Mutations and Alleles
  15
• Chemically induced (other)
  3
• Radiation induced
  2
• Transposon induced
  10
• Genomic Mutations
  15 involving 4930449C09Rik
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  4

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  45
• RefSeq
  1

• Ensembl
  ENSMUSG00000115676 (Evidence)
• NCBI Gene
  73994

Representative Sequences			Length	Strain/Species
genomic	73994	NCBI Gene Model | MGI Sequence Detail	19289	C57BL/6J
transcript	NR_166778	RefSeq | MGI Sequence Detail	1757	C57BL/6

Molecular
Reagents

• All nucleic 4

  cDNA 4

  
  

  Microarray probesets 1

References

• Summaries
  All 37

  Diseases 1

  Phenotypes 27
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
• Latest
  J:387680 Ahn B, et al., Disorganization of Transcriptional Regulation and Alteration of Keratin Family Gene Expression in Hairy Ear Mice. Genes (Basel). 2026 Jan 31;17(2)

TSS for 4930449C09Rik:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr131451	Chr15:63590190-63590222 (+)	9 bp