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Ly6h Gene Detail
Summary
  • Symbol
    Ly6h
  • Name
    lymphocyte antigen 6 family member H
  • Feature Type
    protein coding gene
  • IDs
    MGI:1346030
    NCBI Gene: 23934
  • Member of
    Ly6 cluster
  • Alliance
    genome feature page
  • Transcription Start Sites
    13 TSS
Location &
Maps
more
  • Sequence Map
    Chr15:75436594-75439114 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 15, 34.52 cM, cytoband E1
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    90 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1346030
 protein coding gene Chr15:75424894-75439114 (-)
129S1/SvImJ ENSMUSG00200049829
 protein coding gene Chr15:72554039-72556551 (-)
A/J ENSMUSG00195050858
 protein coding gene Chr15:72528442-72530953 (-)
AKR/J ENSMUSG00220046718
 protein coding gene Chr15:72539505-72542018 (-)
BALB/cJ ENSMUSG00180046844
 protein coding gene Chr15:72355171-72357683 (-)
C3H/HeJ ENSMUSG00175050720
 protein coding gene Chr15:72717054-72719566 (-)
C57BL/6NJ ENSMUSG00215051187
 protein coding gene Chr15:72445601-72448112 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0019891
 protein coding gene Chr15:69508795-69524110 (-)
CAST/EiJ ENSTCUG00005045117
 protein coding gene Chr15:72057935-72060448 (-)
CBA/J ENSMUSG00210043971
 protein coding gene Chr15:72492354-72494865 (-)
DBA/2J ENSMUSG00185046038
 protein coding gene Chr15:72471061-72473572 (-)
FVB/NJ ENSMUSG00205048951
 protein coding gene Chr15:72221741-72224253 (-)
JF1/MsJ ENSUMUG00000046982
 protein coding gene Chr15:72125026-72127537 (-)
LP/J ENSMUSG00230052151
 protein coding gene Chr15:75835070-75837582 (-)
NOD/ShiLtJ ENSMUSG00190030573
 protein coding gene Chr15:72473437-72475946 (-)
NZO/HlLtJ ENSMUSG00225051571
 protein coding gene Chr15:76138282-76140791 (-)
PWK/PhJ ENSLUMG00010051234
 protein coding gene Chr15:72406850-72409358 (-)
SPRET/EiJ ENSMSPG00010046419
 protein coding gene Chr15:74030400-74032909 (-)
WSB/EiJ ENSIUOG00005048570
 protein coding gene Chr15:72533755-72536263 (-)



Homology
more
  • Human Ortholog
    LY6H, lymphocyte antigen 6 family member H
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    LY6H, lymphocyte antigen 6 family member H
  • Synonyms
    NMLY6
  • Links
    NCBI Gene ID: 4062
    UniProt: O94772

  • Chr Location
    8q24.3; chr8:143157914-143160711 (-)  GRCh38
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    29 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    9
  • GO References
    4
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    838
  • Tissues
    68
  • cDNA Data
    35
  • Literature Summary
    7
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 23934 NCBI Gene Model | MGI Sequence Detail 2521 C57BL/6J ±  kb
transcript NM_001411858 RefSeq | MGI Sequence Detail 1072 C57BL/6  
polypeptide Q9WUC3 UniProt | EBI | MGI Sequence Detail 139 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 36
    cDNA 35
    Primer pair 1

    Microarray probesets 3
References
more
  • Summaries
    All 59
    Developmental Gene Expression 7
    Diseases 1
    Gene Ontology 4
    Phenotypes 29
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:387680 Ahn B, et al., Disorganization of Transcriptional Regulation and Alteration of Keratin Family Gene Expression in Hairy Ear Mice. Genes (Basel). 2026 Jan 31;17(2)
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/01/2026
MGI 6.24 		The Jackson Laboratory