1700027A07Rik Gene Detail

Summary

• Symbol
  1700027A07Rik
• Name
  RIKEN cDNA 1700027A07 gene

• Feature Type
  lncRNA gene
• IDs
  MGI:1917246
  NCBI Gene: 69996
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr15:78796163-78800032 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, 37.70 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  195 from dbSNP Build 142
• Strain Annotations
  26

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1917246	lncRNA gene	Chr15:78796163-78800032 (-)
129S1/SvImJ	ENSMUSG00200053804	lncRNA gene	Chr15:75909025-75910719 (-)
A/J	ENSMUSG00195048031	protein coding gene	Chr15:75851291-75853227 (-)
A/J	ENSMUSG00195052170	lncRNA gene	Chr15:75851368-75853073 (-)
AKR/J	ENSMUSG00220049902	protein coding gene	Chr15:75894742-75896677 (-)
AKR/J	ENSMUSG00220052852	lncRNA gene	Chr15:75894819-75896523 (-)
BALB/cJ	ENSMUSG00180053404	lncRNA gene	Chr15:75728384-75730089 (-)
BALB/cJ	ENSMUSG00180047135	protein coding gene	Chr15:75728307-75730243 (-)
C3H/HeJ	ENSMUSG00175046795	protein coding gene	Chr15:76039604-76041539 (-)
C3H/HeJ	ENSMUSG00175053102	lncRNA gene	Chr15:76039681-76041385 (-)
C57BL/6NJ	ENSMUSG00215053426	lncRNA gene	Chr15:75806476-75808170 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002923	antisense lncRNA gene	Chr15:72910903-72912560 (-)
CAST/EiJ	ENSTCUG00005048541	lncRNA gene	Chr15:75353023-75354704 (-)
CBA/J	ENSMUSG00210042945	protein coding gene	Chr15:75814800-75816736 (-)
CBA/J	ENSMUSG00210049076	lncRNA gene	Chr15:75814877-75816582 (-)
DBA/2J	ENSMUSG00185046222	protein coding gene	Chr15:75824610-75826545 (-)
DBA/2J	ENSMUSG00185051617	lncRNA gene	Chr15:75824687-75826391 (-)
FVB/NJ	ENSMUSG00205047179	protein coding gene	Chr15:75544432-75546368 (-)
FVB/NJ	ENSMUSG00205051003	lncRNA gene	Chr15:75544509-75546214 (-)
JF1/MsJ	ENSUMUG00000056140	lncRNA gene	Chr15:75400787-75402512 (-)
LP/J	ENSMUSG00230052614	lncRNA gene	Chr15:79157461-79159155 (-)
NOD/ShiLtJ	ENSMUSG00190053795	lncRNA gene	Chr15:75834926-75836620 (-)
NZO/HlLtJ	ENSMUSG00225053714	lncRNA gene	Chr15:79485595-79487289 (-)
PWK/PhJ	ENSLUMG00010052096	lncRNA gene	Chr15:75621292-75623015 (-)
SPRET/EiJ	ENSMSPG00010051049	lncRNA gene	Chr15:77284817-77286502 (-)
WSB/EiJ	ENSIUOG00005049941	lncRNA gene	Chr15:75889961-75891671 (-)

Homology

• Gene Tree
  1700027A07Rik
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  18 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving 1700027A07Rik
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  597
• cDNA Data
  2

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  32
• UniProt
  1

• Ensembl
  ENSMUSG00000084864 (Evidence)
• NCBI Gene
  69996

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000084864	Ensembl Gene Model | MGI Sequence Detail	3870	C57BL/6J
transcript	ENSMUST00000380758	Ensembl | MGI Sequence Detail	870	Not Applicable
polypeptide	Q3V2K6	UniProt | EBI | MGI Sequence Detail	78	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 2

  cDNA 2

  
  

  Microarray probesets 1

References

• Summaries
  All 28

  Phenotypes 18
• Earliest
  J:7688 Lane PW, et al., Association of megacolon with a new dominant spotting gene (Dom) in the mouse. J Hered. 1984 Nov-Dec;75(6):435-9
• Latest
  J:387680 Ahn B, et al., Disorganization of Transcriptional Regulation and Alteration of Keratin Family Gene Expression in Hairy Ear Mice. Genes (Basel). 2026 Jan 31;17(2)