4933427E11Rik Gene Detail

Summary

• Symbol
  4933427E11Rik
• Name
  RIKEN cDNA 4933427E11 gene

• Feature Type
  lncRNA gene
• IDs
  MGI:1914019
  NCBI Gene: 66769
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr15:74581010-74582223 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, 34.26 cM, cytoband E1
• Mapping Data
  2 experiments

Strain
Comparison

• SNPs within 2kb
  150 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1914019	lncRNA gene	Chr15:74581002-74582323 (+)
129S1/SvImJ	ENSMUSG00200053598	lncRNA gene	Chr15:71685014-71686226 (+)
A/J	ENSMUSG00195052177	lncRNA gene	Chr15:71754029-71755243 (+)
AKR/J	ENSMUSG00220053288	lncRNA gene	Chr15:71674576-71675790 (+)
BALB/cJ	ENSMUSG00180053297	lncRNA gene	Chr15:71526495-71527708 (+)
C3H/HeJ	ENSMUSG00175053352	lncRNA gene	Chr15:71888432-71889645 (+)
C57BL/6NJ	ENSMUSG00215052979	lncRNA gene	Chr15:71583658-71584871 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002921	antisense lncRNA gene	Chr15:68245251-68246482 (+)
CAST/EiJ	ENSTCUG00005048279	lncRNA gene	Chr15:71185884-71187115 (+)
CBA/J	ENSMUSG00210049971	lncRNA gene	Chr15:71663785-71664998 (+)
DBA/2J	ENSMUSG00185052597	lncRNA gene	Chr15:71609168-71610381 (+)
FVB/NJ	ENSMUSG00205052317	lncRNA gene	Chr15:71355034-71356248 (+)
JF1/MsJ	ENSUMUG00000055960	lncRNA gene	Chr15:71248293-71249505 (+)
LP/J	ENSMUSG00230052827	lncRNA gene	Chr15:74973243-74974456 (+)
NOD/ShiLtJ	ENSMUSG00190053937	lncRNA gene	Chr15:71720161-71721374 (+)
NZO/HlLtJ	ENSMUSG00225053900	lncRNA gene	Chr15:75246907-75248120 (+)
PWK/PhJ	ENSLUMG00010053201	lncRNA gene	Chr15:71525824-71527036 (+)
SPRET/EiJ	ENSMSPG00010050257	lncRNA gene	Chr15:73210053-73211259 (+)
WSB/EiJ	ENSIUOG00005049523	lncRNA gene	Chr15:71705965-71707178 (+)

Homology

• Gene Tree
  4933427E11Rik
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  24 phenotype references
  

• All Mutations and Alleles
  5
• Chemically induced (other)
  3
• Radiation induced
  2
• Genomic Mutations
  5 involving 4933427E11Rik
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  8

Tissue x Stage Matrix

• Other Mouse Links
  Allen Institute
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  33
• RefSeq
  1
• UniProt
  4

• Ensembl
  ENSMUSG00000044276 (Evidence)
• NCBI Gene
  66769

Representative Sequences			Length	Strain/Species
genomic	66769	NCBI Gene Model | MGI Sequence Detail	1214	C57BL/6J
transcript	NR_033197	RefSeq | MGI Sequence Detail	1214	C57BL/6
polypeptide	Q9D3Y4	UniProt | EBI | MGI Sequence Detail	167	Not Applicable

Protein
Information

• UniProt
  4 Sequences

Molecular
Reagents

• All nucleic 8

  cDNA 8

  
  

  Microarray probesets 2

References

• Summaries
  All 39

  Diseases 1

  Phenotypes 24
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
• Latest
  J:387680 Ahn B, et al., Disorganization of Transcriptional Regulation and Alteration of Keratin Family Gene Expression in Hairy Ear Mice. Genes (Basel). 2026 Jan 31;17(2)

TSS for 4933427E11Rik:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr131572	Chr15:74581218-74581247 (+)	223 bp