5730414N17Rik Gene Detail

Summary

• Symbol
  5730414N17Rik
• Name
  RIKEN cDNA 5730414N17 gene

• Feature Type
  lncRNA gene
• IDs
  MGI:1917774
  NCBI Gene: 70524
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr15:98770525-98771963 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, Syntenic
• Mapping Data
  2 experiments

Strain
Comparison

• SNPs within 2kb
  84 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1917774	lncRNA gene	Chr15:98770525-98771963 (+)
129S1/SvImJ	ENSMUSG00200052194	lncRNA gene	Chr15:95958586-95960027 (+)
A/J	ENSMUSG00195045669	lncRNA gene	Chr15:95839378-95840821 (+)
AKR/J	ENSMUSG00220049547	lncRNA gene	Chr15:95844742-95846185 (+)
BALB/cJ	ENSMUSG00180046501	lncRNA gene	Chr15:95746012-95747451 (+)
C3H/HeJ	ENSMUSG00175047655	lncRNA gene	Chr15:96019442-96020885 (+)
C57BL/6NJ	ENSMUSG00215052000	lncRNA gene	Chr15:95808643-95810082 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005047033	lncRNA gene	Chr15:95283312-95284741 (+)
CBA/J	ENSMUSG00210032504	lncRNA gene	Chr15:95804318-95805762 (+)
DBA/2J	ENSMUSG00185042409	lncRNA gene	Chr15:95847970-95849416 (+)
FVB/NJ	ENSMUSG00205048195	lncRNA gene	Chr15:95544078-95545518 (+)
JF1/MsJ	ENSUMUG00000057102	lncRNA gene	Chr15:95315959-95317386 (+)
LP/J	ENSMUSG00230040553	lncRNA gene	Chr15:99182312-99183752 (+)
NOD/ShiLtJ	ENSMUSG00190049651	lncRNA gene	Chr15:95823801-95825241 (+)
NZO/HlLtJ	ENSMUSG00225043682	lncRNA gene	Chr15:99445632-99447073 (+)
PWK/PhJ	ENSLUMG00010051043	lncRNA gene	Chr15:95514707-95516148 (+)
SPRET/EiJ	ENSMSPG00010050070	lncRNA gene	Chr15:97336031-97337459 (+)
WSB/EiJ	ENSIUOG00005040173	lncRNA gene	Chr15:95936250-95937688 (+)

Homology

• Gene Tree
  5730414N17Rik
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  16 phenotype references
  

• All Mutations and Alleles
  1
• Radiation induced
  1
• Genomic Mutations
  1 involving 5730414N17Rik
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  2

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22

• Ensembl
  ENSMUSG00000116506 (Evidence)
• NCBI Gene
  70524

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000116506	Ensembl Gene Model | MGI Sequence Detail	1439	C57BL/6J
transcript	ENSMUST00000230130	Ensembl | MGI Sequence Detail	1439	Not Applicable

Molecular
Reagents

• All nucleic 2

  cDNA 2

Other
Accession IDs

MGI:2146259

References

• Summaries
  All 24

  Phenotypes 16
• Earliest
  J:7688 Lane PW, et al., Association of megacolon with a new dominant spotting gene (Dom) in the mouse. J Hered. 1984 Nov-Dec;75(6):435-9
• Latest
  J:387680 Ahn B, et al., Disorganization of Transcriptional Regulation and Alteration of Keratin Family Gene Expression in Hairy Ear Mice. Genes (Basel). 2026 Jan 31;17(2)

TSS for 5730414N17Rik:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr132967	Chr15:98768896-98768927 (+)	-1,613 bp