About   Help   FAQ
1700031M16Rik Gene Detail
Summary
  • Symbol
    1700031M16Rik
  • Name
    RIKEN cDNA 1700031M16 gene
  • Synonyms
    4930413L20Rik
Location &
Maps
more
  • Sequence Map
    Chr15:98296946-98311456 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 15, 54.40 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    156 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1920552
 lncRNA gene Chr15:98296326-98314016 (+)
129S1/SvImJ MGP_129S1SvImJ_G0022295
 protein coding gene Chr15:100121348-100139188 (+)
A/J MGP_AJ_G0022254
 protein coding gene Chr15:96177110-96194578 (+)
AKR/J MGP_AKRJ_G0022228
 protein coding gene Chr15:99099029-99114332 (+)
BALB/cJ MGP_BALBcJ_G0022260
 protein coding gene Chr15:96369882-96387267 (+)
C3H/HeJ MGP_C3HHeJ_G0022029
 protein coding gene Chr15:99156743-99174278 (+)
C57BL/6NJ MGP_C57BL6NJ_G0022705
 protein coding gene Chr15:103822922-103840767 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0020230
 protein coding gene Chr15:92085963-92103465 (+)
CAST/EiJ MGP_CASTEiJ_G0021551
 protein coding gene Chr15:100023018-100043298 (+)
CBA/J MGP_CBAJ_G0021997
 protein coding gene Chr15:107335114-107353090 (+)
DBA/2J MGP_DBA2J_G0022123
 protein coding gene Chr15:95624122-95639569 (+)
FVB/NJ MGP_FVBNJ_G0022103
 protein coding gene Chr15:94594305-94611684 (+)
LP/J MGP_LPJ_G0022195
 protein coding gene Chr15:100260750-100281827 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0022123
 protein coding gene Chr15:111371495-111389328 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0022720
 protein coding gene Chr15:99206753-99225468 (+)
PWK/PhJ MGP_PWKPhJ_G0021293
 protein coding gene Chr15:95736479-95752191 (+)
SPRET/EiJ MGP_SPRETEiJ_G0021127
 protein coding gene Chr15:99026161-99045000 (+)
WSB/EiJ MGP_WSBEiJ_G0021601
 protein coding gene Chr15:99745337-99762780 (+)



Homology
more
  • Human Ortholog
    C12orf54, chromosome 12 open reading frame 54
  • Vertebrate Orthologs
    1
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    C12orf54, chromosome 12 open reading frame 54
  • Synonyms
    HSD-29, HSD-30
  • Links
    NCBI Gene ID: 121273
    neXtProt AC: NX_Q6X4T0
    UniProt: Q6X4T0

  • Chr Location
    12q13.11; chr12:48413154-48496524 (+)  GRCh38
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    20 phenotype references
  • All Mutations and Alleles
    3
  • Chemically induced (other)
    1
  • Radiation induced
    2
  • Genomic Mutations
    3 involving 1700031M16Rik
  • Find Mice (IMSR)
    0 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    33
Sequences &
Gene Models
less
  • All Sequences
    27
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000099353 Ensembl Gene Model | MGI Sequence Detail 14511 C57BL/6J ±  kb
transcript ENSMUST00000231222 Ensembl | MGI Sequence Detail 343 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 33
    cDNA 33

    Microarray probesets 1
Other
Accession IDs
less
MGI:1921028
References
more
  • Summaries
    All 30
    Diseases 1
    Phenotypes 20
  • Earliest
    J:7688 Lane PW, et al., Association of megacolon with a new dominant spotting gene (Dom) in the mouse. J Hered. 1984 Nov-Dec;75(6):435-9
  • Latest
    J:285676 Suzuki A, et al., Genes and microRNAs associated with mouse cleft palate: A systematic review and bioinformatics analysis. Mech Dev. 2018 Apr;150:21-27
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory