4933438A12Rik Gene Detail

Summary

• Symbol
  4933438A12Rik
• Name
  RIKEN cDNA 4933438A12 gene

• Feature Type
  lncRNA gene
• IDs
  MGI:1918493
  NCBI Gene: 71243
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr15:91481728-91488879 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, 46.07 cM, cytoband F1
• Mapping Data
  2 experiments

Strain
Comparison

• SNPs within 2kb
  311 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1918493	lncRNA gene	Chr15:91481728-91488879 (+)
129S1/SvImJ	ENSMUSG00200036016	lncRNA gene	Chr15:88636515-88643608 (+)
A/J	ENSMUSG00195020671	lncRNA gene	Chr15:88531224-88538317 (+)
AKR/J	ENSMUSG00220031556	lncRNA gene	Chr15:88578634-88585731 (+)
BALB/cJ	ENSMUSG00180015546	lncRNA gene	Chr15:88409622-88416718 (+)
C3H/HeJ	ENSMUSG00175028639	lncRNA gene	Chr15:88717674-88724768 (+)
C57BL/6NJ	ENSMUSG00215033861	lncRNA gene	Chr15:88520266-88527357 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0005107	lincRNA gene	Chr15:85455063-85461852 (+)
CAST/EiJ	ENSTCUG00005032103	lncRNA gene	Chr15:88029916-88037015 (+)
CBA/J	ENSMUSG00210013189	lncRNA gene	Chr15:88487124-88494216 (+)
DBA/2J	ENSMUSG00185023167	lncRNA gene	Chr15:88502220-88509297 (+)
FVB/NJ	ENSMUSG00205038571	lncRNA gene	Chr15:88259479-88266571 (+)
JF1/MsJ	ENSUMUG00000046046	lncRNA gene	Chr15:88059430-88066083 (+)
LP/J	ENSMUSG00230046737	lncRNA gene	Chr15:91858860-91865953 (+)
NOD/ShiLtJ	ENSMUSG00190029792	lncRNA gene	Chr15:88532236-88539327 (+)
NZO/HlLtJ	ENSMUSG00225044021	lncRNA gene	Chr15:92173152-92180253 (+)
PWK/PhJ	ENSLUMG00010034815	lncRNA gene	Chr15:88207574-88214669 (+)
SPRET/EiJ	ENSMSPG00010014510	lncRNA gene	Chr15:90005783-90011721 (+)
WSB/EiJ	ENSIUOG00005011586	lncRNA gene	Chr15:88589475-88596587 (+)

Homology

• Gene Tree
  4933438A12Rik
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  21 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  1
• Radiation induced
  2
• Genomic Mutations
  3 involving 4933438A12Rik
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  28

• Ensembl
  ENSMUSG00000086160 (Evidence)
• NCBI Gene
  71243

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000086160	Ensembl Gene Model | MGI Sequence Detail	7152	C57BL/6J
transcript	ENSMUST00000144579	Ensembl | MGI Sequence Detail	1038	Not Applicable

Molecular
Reagents

• All nucleic 1

  cDNA 1

  
  

  Microarray probesets 1

References

• Summaries
  All 30

  Diseases 1

  Phenotypes 21
• Earliest
  J:7688 Lane PW, et al., Association of megacolon with a new dominant spotting gene (Dom) in the mouse. J Hered. 1984 Nov-Dec;75(6):435-9
• Latest
  J:387680 Ahn B, et al., Disorganization of Transcriptional Regulation and Alteration of Keratin Family Gene Expression in Hairy Ear Mice. Genes (Basel). 2026 Jan 31;17(2)