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4933438A12Rik Gene Detail
Summary
  • Symbol
    4933438A12Rik
  • Name
    RIKEN cDNA 4933438A12 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1918493
    NCBI Gene: 71243
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr15:91481786-91488879 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 15, 46.07 cM, cytoband F1
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    35 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1918493
 lncRNA gene Chr15:91481786-91488879 (+)
129S1/SvImJ MGP_129S1SvImJ_G0005617
 lincRNA gene Chr15:92906840-92915174 (+)
A/J MGP_AJ_G0005604
 lincRNA gene Chr15:89314881-89325003 (+)
AKR/J MGP_AKRJ_G0005583
 lincRNA gene Chr15:91971365-91978233 (+)
BALB/cJ MGP_BALBcJ_G0005584
 lincRNA gene Chr15:89445661-89452941 (+)
C3H/HeJ MGP_C3HHeJ_G0005531
 lincRNA gene Chr15:91969158-91981665 (+)
C57BL/6NJ MGP_C57BL6NJ_G0005742
 lincRNA gene Chr15:96299610-96308909 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0005107
 lincRNA gene Chr15:85455063-85461852 (+)
CAST/EiJ MGP_CASTEiJ_G0005475
 lincRNA gene Chr15:92803437-92811932 (+)
CBA/J MGP_CBAJ_G0005521
 lincRNA gene Chr15:99526713-99536142 (+)
DBA/2J MGP_DBA2J_G0005536
 lincRNA gene Chr15:88758837-88765807 (+)
FVB/NJ MGP_FVBNJ_G0005563
 lincRNA gene Chr15:87802189-87809436 (+)
LP/J MGP_LPJ_G0005620
 lincRNA gene Chr15:93043161-93051670 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0005548
 lincRNA gene Chr15:103913542-103920991 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0005742
 lincRNA gene Chr15:92080056-92087791 (+)
PWK/PhJ MGP_PWKPhJ_G0005424
 lincRNA gene Chr15:88822162-88829488 (+)
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0005525
 lincRNA gene Chr15:92536104-92543487 (+)



Homology
less
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    20 phenotype references
  • All Mutations and Alleles
    3
  • Chemically induced (other)
    1
  • Radiation induced
    2
  • Genomic Mutations
    3 involving 4933438A12Rik
  • Find Mice (IMSR)
    0 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    1
Sequences &
Gene Models
less
  • All Sequences
    20
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000086160 Ensembl Gene Model | MGI Sequence Detail 7094 C57BL/6J ±  kb
transcript ENSMUST00000144579 Ensembl | MGI Sequence Detail 1013 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1

    Microarray probesets 1
References
more
  • Summaries
    All 28
    Diseases 1
    Phenotypes 20
  • Earliest
    J:7688 Lane PW, et al., Association of megacolon with a new dominant spotting gene (Dom) in the mouse. J Hered. 1984 Nov-Dec;75(6):435-9
  • Latest
    J:285676 Suzuki A, et al., Genes and microRNAs associated with mouse cleft palate: A systematic review and bioinformatics analysis. Mech Dev. 2018 Apr;150:21-27
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory