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Utp23 Gene Detail
Summary
  • Symbol
    Utp23
  • Name
    UTP23 small subunit processome component
  • Synonyms
    1700010I21Rik, D530033C11Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1925831
    NCBI Gene: 78581
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr15:51740837-51748018 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 15, 19.49 cM, cytoband D1
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    55 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1925831
 protein coding gene Chr15:51740825-51748018 (+)
129S1/SvImJ MGP_129S1SvImJ_G0021838
 protein coding gene Chr15:50827113-50836681 (+)
A/J MGP_AJ_G0021798
 protein coding gene Chr15:48804221-48811713 (+)
AKR/J MGP_AKRJ_G0021779
 protein coding gene Chr15:50186537-50193502 (+)
BALB/cJ MGP_BALBcJ_G0021805
 protein coding gene Chr15:49066085-49074171 (+)
C3H/HeJ MGP_C3HHeJ_G0021579
 protein coding gene Chr15:50311340-50321249 (+)
C57BL/6NJ MGP_C57BL6NJ_G0022244
 protein coding gene Chr15:52820162-52828889 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0019781
 protein coding gene Chr15:45875375-45882593 (+)
CAST/EiJ MGP_CASTEiJ_G0021096
 protein coding gene Chr15:50859044-50865262 (+)
CBA/J MGP_CBAJ_G0021548
 protein coding gene Chr15:54734390-54748142 (+)
DBA/2J MGP_DBA2J_G0021672
 protein coding gene Chr15:48687822-48695653 (+)
FVB/NJ MGP_FVBNJ_G0021650
 protein coding gene Chr15:47886741-47894223 (+)
LP/J MGP_LPJ_G0021742
 protein coding gene Chr15:50625300-50632412 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0021674
 protein coding gene Chr15:59720233-59729294 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0022267
 protein coding gene Chr15:50526372-50534096 (+)
PWK/PhJ MGP_PWKPhJ_G0020841
 protein coding gene Chr15:48789180-48795604 (+)
SPRET/EiJ MGP_SPRETEiJ_G0020678
 protein coding gene Chr15:50247096-50254510 (+)
WSB/EiJ MGP_WSBEiJ_G0021151
 protein coding gene Chr15:50511187-50520228 (+)



Homology
more
  • Human Ortholog
    UTP23, UTP23 small subunit processome component
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    UTP23, UTP23 small subunit processome component
  • Synonyms
    C8orf53
  • Links
    NCBI Gene ID: 84294
    neXtProt AC: NX_Q9BRU9
    UniProt: Q9BRU9

  • Chr Location
    8q24.11; chr8:116766505-116849463 (+)  GRCh38
Human Diseases
more
  • Diseases
    1 with human UTP23 associations

Human Disease Mouse Models
      
IDs
Click on a disease name to see all genes associated with that disease.

  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    14 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    8
  • GO References
    4
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    24
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 78581 NCBI Gene Model | MGI Sequence Detail 7182 C57BL/6J ±  kb
transcript NM_030132 RefSeq | MGI Sequence Detail 2917 C57BL/6  
polypeptide Q9CX11 UniProt | EBI | MGI Sequence Detail 249 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 24
    cDNA 24

    Microarray probesets 6
Other
Accession IDs
less
MGI:1922749, MGI:2146051, MGI:2146268
References
more
  • Summaries
    All 39
    Diseases 1
    Gene Ontology 4
    Phenotypes 14
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:218306 Wang M, et al., Two orthogonal cleavages separate subunit RNAs in mouse ribosome biogenesis. Nucleic Acids Res. 2014;42(17):11180-91
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory