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Mapping Data
Experiment
  • Experiment
    TEXT-Physical Mapping
  • Chromosome
    16
  • Reference
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • ID
    MGI:2449333
Genes
GeneAlleleAssay TypeDescription
Ndufb4 assembly
0610009F21Rik assembly
Tctex1d2 assembly
Gtpbp8 assembly
Fopnl assembly
0710001L09Rik assembly
Cmss1 assembly
Cfap298 assembly
Etv5 assembly
1110008E08Rik assembly
1810013L24Rik assembly
Cldnd1 assembly
Ppm1f assembly
Ube2v2 assembly
Mrap assembly
1110025L11Rik assembly
Krtap22-2 assembly
Klhl24 assembly
Morc3 assembly
Lppos assembly
1110057P08Rik assembly
B3galt5 assembly
Krtap20-2 assembly
Chmp2b assembly
Smim11 assembly
Lamp3 assembly
Pkp2 assembly
Pkp2 assembly
Naa60 assembly
1300002E11Rik assembly
Ehhadh assembly
Ndufb4 assembly
Snap29 assembly
Cpn2 assembly
Wdr53 assembly
1300002E11Rik assembly
Cep19 assembly
1600002D24Rik assembly
Hspa13 assembly
1600019K03Rik assembly
Zfp654 assembly
Mb21d2 assembly
Parp14 assembly
1700003L19Rik assembly
1700007H22Rik assembly
1700007L15Rik assembly
Tmem44 assembly
Ccdc54 assembly
D16Ertd472e assembly
1700010K23Rik assembly
1700015P03Rik assembly
1700016D08Rik assembly
1700020B03Rik assembly
Rubcn assembly
1700022E09Rik assembly
St3gal6 assembly
1700025H01Rik assembly
Igsf11 assembly
1700026J12Rik assembly
Sept12 assembly
1700029J03Rik assembly
1700037C18Rik assembly
1700041M19Rik assembly
1700048G13Rik assembly
1700048M11Rik assembly
1700056N10Rik assembly
1700063K16Rik assembly
1700066C05Rik assembly
1700084M22Rik assembly
Eva1c assembly
1700093J21Rik assembly
Umps assembly
1700096C16Rik assembly
Vgll3 assembly
1700116B05Rik assembly
1700119H24Rik assembly
Thap7 assembly
Pla2g10os assembly
Paxbp1 assembly
Zfp654 assembly
Ece2 assembly
Lrrc58 assembly
1810013L24Rik assembly
Ydjc assembly
Iglv1 assembly
1810044K17Rik assembly
Dnaja3 assembly
1810053B23Rik assembly
1810053B23Rik assembly
Igsf5 assembly
Csta2 assembly
Pigx assembly
Kcne2 assembly
2210009P08Rik assembly
Pdxdc1 assembly
Usp7 assembly
2210020O09Rik assembly
Yars2 assembly
Zfp148 assembly
Kalrn assembly
Cryzl1 assembly
Lrch3 assembly
2300009N04Rik assembly
Krtap26-1 assembly
2310004O12Rik assembly
Tmem45a2 assembly
Senp2 assembly
Spidr assembly
Wdr5b assembly
D16Ertd472e assembly
Smco1 assembly
Ccdc74a assembly
2310015D24Rik assembly
Cluap1 assembly
2310034C09Rik assembly
Teddm3 assembly
2310043M15Rik assembly
Dzip3 assembly
Fam162a assembly
2310057N15Rik assembly
2310061A09Rik assembly
Zbtb11os1 assembly
2310061N02Rik assembly
2310063J23Rik assembly
2310066N15Rik assembly
2310079G19Rik assembly
Iqcg assembly
Rsl1d1 assembly
Cryzl1 assembly
Tctex1d2 assembly
Mzt2 assembly
Riox2 assembly
Dppa2 assembly
Dppa4 assembly
2410124H12Rik assembly
Senp7 assembly
2510002D24Rik assembly
2510009E07Rik assembly
2510042H03Rik assembly
Robo2 assembly
Chaf1b assembly
Mzt2 assembly
2610005G05Rik assembly
Ccdc191 assembly
Atg3 assembly
Fbxo45 assembly
2610020C07Rik assembly
2610020F03Rik assembly
Tfrc assembly
Tmem39a assembly
2610034B04Rik assembly
Mis18a assembly
Tomm70a assembly
Cluap1 assembly
Ttc3 assembly
Cxadr assembly
Klhl22 assembly
2610318N02Rik assembly
Dop1b assembly
Cmss1 assembly
Vasn assembly
Ccdc50 assembly
Shisa9 assembly
Cdip1 assembly
Plaat1 assembly
1700037C18Rik assembly
Mir99ahg assembly
Aifm3 assembly
Cep97 assembly
2810404F17Rik assembly
2810407A14Rik assembly
Snn assembly
Txndc11 assembly
Senp7 assembly
Glyr1 assembly
2810421E14Rik assembly
Tmem186 assembly
Naa50 assembly
2810455B08Rik assembly
2810481J17Rik assembly
2900006G07Rik assembly
Tmem41a assembly
Abcc5 assembly
Bmerb1 assembly
2900022M12Rik assembly
Senp7 assembly
2900037P16Rik assembly
2900041H08Rik assembly
Fam131a assembly
Dgkg assembly
2900064B18Rik assembly
Camk2n2 assembly
Cadm2 assembly
Bfar assembly
1810013L24Rik assembly
Rnf168 assembly
3110001I22Rik assembly
Qtrt2 assembly
3110049I03Rik assembly
Chodl assembly
Tekt5 assembly
Riox2 assembly
Fyttd1 assembly
Hspbap1 assembly
Smpd4 assembly
Tmem186 assembly
Atp13a4 assembly
Filip1l assembly
4632428C04Rik assembly
Cd200r3 assembly
Cd200r3 assembly
4833415N18Rik assembly
4833419O12Rik assembly
Ift57 assembly
4833423F13Rik assembly
Eif4a2 assembly
Marf1 assembly
4921517D16Rik assembly
Gramd1c assembly
4930403O18Rik assembly
4930404A05Rik assembly
4930404I05Rik assembly
4930405D01Rik assembly
4930414F18Rik assembly
Kcnj15 assembly
4930420G21Rik assembly
4930423O20Rik assembly
4930428D20Rik assembly
4930565N06Rik assembly
Klhl24 assembly
4930429N05Rik assembly
Ccdc116 assembly
Tex55 assembly
Efcab1 assembly
Tbc1d23 assembly
Lrrc74b assembly
4930453N24Rik assembly
Timmdc1 assembly
4930461C15Rik assembly
Qtrt2 assembly
4930478L05Rik assembly
4930483P17Rik assembly
4930500H12Rik assembly
4930509G22Rik assembly
Tmem114 assembly
Rpl39l assembly
Ydjc assembly
Ltn1 assembly
4930534H18Rik assembly
Senp2 assembly
4930542C21Rik assembly
4930542D17Rik assembly
4930546O09Rik assembly
4930547E14Rik assembly
4930551I23Rik assembly
4930552F14Rik assembly
4930553E22Rik assembly
4930553J12Rik assembly
4930556C24Rik assembly
Atf7ip2 assembly
Fam243 assembly
4930565N06Rik assembly
4930567J20Rik assembly
Gsc2 assembly
4930570E03Rik assembly
Cmss1 assembly
4930572P05Rik assembly
4930578N18Rik assembly
4930586H24Rik assembly
4930590A17Rik assembly
4931406G06Rik assembly
4931407J08Rik assembly
Eva1c assembly
4931420L22Rik assembly
4932412D23Rik assembly
Clec16a assembly
Maats1 assembly
4932438H23Rik assembly
Tmem30c assembly
4933404G15Rik assembly
Zfp597 assembly
Tmem30c assembly
4933411O13Rik assembly
Sept12 assembly
Ppm1f assembly
4933431I19Rik assembly
4933432I09Rik assembly
Snx29 assembly
Ifitm7 assembly
Gpr15 assembly
Itgb2l assembly
Lmln assembly
Brwd1 assembly
Pak2 assembly
Dubr assembly
Nudt16l1 assembly
5430404G13Rik assembly
Efcab1 assembly
Tprg assembly
Lrrc15 assembly
Krtap7-1 assembly
5430434N17Rik assembly
Sh3bgr assembly
Usf3 assembly
Heg1 assembly
Bbx assembly
Wrb assembly
Bbx assembly
Tra2b assembly
Urb1 assembly
Ccdc50 assembly
Tbccd1 assembly
Tmem41a assembly
5730596P11Rik assembly
C2cd2 assembly
5830438M01Rik assembly
5830440H09Rik assembly
N6amt1 assembly
5830449F15Rik assembly
Rtp4 assembly
5830487K18Rik assembly
Senp7 assembly
Bach1 assembly
Senp5 assembly
Golgb1 assembly
6330408M09Rik assembly
Ece2 assembly
Usp16 assembly
Dzip3 assembly
Magef1 assembly
Il1rap assembly
Klhl24 assembly
Il10rb assembly
6720473M08Rik assembly
6720473M11Rik assembly
Nsun3 assembly
Iqcb1 assembly
Zbtb20 assembly
Gsk3b assembly
8030451O07Rik assembly
8030498J20Rik assembly
Ccdc191 assembly
Gsk3b assembly
Nrip1 assembly
9030023J02Rik assembly
9030404E10Rik assembly
9030420N05Rik assembly
Fam3b assembly
Adgrg7 assembly
Cd47 assembly
9230106L01Rik assembly
Zbtb11 assembly
9230117E06Rik assembly
9330155M09Rik assembly
Tmem44 assembly
9330168O09Rik assembly
Atp13a4 assembly
Fgd4 assembly
9330209N08Rik assembly
Zpld1 assembly
9430029E18Rik assembly
9430040K09Rik assembly
9430053O09Rik assembly
9430076D03Rik assembly
Robo2 assembly
9430092D12Rik assembly
Psmd2 assembly
9530002O20Rik assembly
9530003O04Rik assembly
9530020O07Rik assembly
Heg1 assembly
Acap2 assembly
Mylk assembly
Adamts5 assembly
9630033C03Rik assembly
Abat assembly
Poglut1 assembly
Fbxo40 assembly
Dgcr2 assembly
Stx19 assembly
A130034M23Rik assembly
A130072N09Rik assembly
Tmprss15 assembly
A230028O05Rik assembly
Med15 assembly
A330053N03Rik assembly
A430042E23Rik assembly
Zc3h7a assembly
Polq assembly
A530030E21Rik assembly
A630036G19Rik assembly
A630044M17Rik assembly
A730021G18Rik assembly
Senp5 assembly
Grik1 assembly
Stxbp5l assembly
Cadm2 assembly
A930003A15Rik assembly
Synj1 assembly
A930006K02Rik assembly
Ccdc58 assembly
A930011E06Rik assembly
A930013N22Rik assembly
Arl13b assembly
Zbtb20 assembly
Mylk assembly
2510002D24Rik assembly
Cip2a assembly
9530053J19Rik assembly
9430099O15Rik assembly
Lpp assembly
Cggbp1 assembly
Abcc1 assembly
Adipoq assembly
Adprh assembly
D630030B22Rik assembly
D630050H08Rik assembly
Vps8 assembly
Abi3bp assembly
Tfap4 assembly
Urb1 assembly
D230034L24Rik assembly
Rrn3 assembly
Alcam assembly
Ripk4 assembly
Arl6 assembly
Atp5o assembly
Osbpl11 assembly
Golgb1 assembly
Clic6 assembly
Srl assembly
Slc51a assembly
Lsamp assembly
Dlg1 assembly
Lpp assembly
B230114A03Rik assembly
Tmem50b assembly
Hspa13 assembly
B230343J05Rik assembly
B3gnt5 assembly
Sod1 assembly
Zbtb21 assembly
Cd47 assembly
B4galt4 assembly
B630019A10Rik assembly
Sidt1 assembly
Bace2 assembly
Ece2 assembly
Parp9 assembly
Bdh1 assembly
Boc assembly
Btg3 assembly
C030010L15Rik assembly
C030024C20Rik assembly
C030046M01Rik assembly
Trat1 assembly
C130002M15Rik assembly
C130020P16Rik assembly
C130023A14Rik assembly
Map3k13 assembly
Liph assembly
Ppil2 assembly
C330004M20Rik assembly
Igf2bp2 assembly
Lrrc58 assembly
C330019O22Rik assembly
C530005L23Rik assembly
Arl13b assembly
Cpped1 assembly
Atp13a5 assembly
C730014E05Rik assembly
Phldb2 assembly
Cct8 assembly
Arhgap31 assembly
Cldn1 assembly
Cldn14 assembly
Cldn16 assembly
Col8a1 assembly
Cpox assembly
Crkl assembly
Cxadr assembly
Tbc1d23 assembly
Erg assembly
D130020G16Rik assembly
D130060J10Rik assembly
D230002P11Rik assembly
Robo2 assembly
Nlrc3 assembly
Abhd10 assembly
D330005D02Rik assembly
Comt assembly
D330022H12Rik assembly
D330026I07Rik assembly
D330040H18Rik assembly
D430001F17Rik assembly
Brwd1 assembly
D530031A16Rik assembly
Mir99ahg assembly
Slc35a5 assembly
D930006K15Rik assembly
D930030D11Rik assembly
D930030I03Rik assembly
Lipi assembly
Abi3bp assembly
Dnajb11 assembly
Dnm1l assembly
Donson assembly
Psmg1 assembly
Vps26c assembly
Pigp assembly
App assembly
Eif4g1 assembly
Prdm15 assembly
E130102B10Rik assembly
Cep97 assembly
Rrn3 assembly
D16Ertd472e assembly
Zdhhc8 assembly
Slc12a8 assembly
Dgkg assembly
Nrros assembly
Tfrc assembly
Kalrn assembly
Epha3 assembly
Epha6 assembly
Ercc4 assembly
Dcbld2 assembly
Etv5 assembly
Pigz assembly
Golgb1 assembly
Fetub assembly
Ccdc14 assembly
Gbe1 assembly
Gcsam assembly
Gp5 assembly
Gtf2e1 assembly
Hcls1 assembly
Plaat1 assembly
Ifnar2 assembly
Il1rap assembly
Itgb2l assembly
Itsn1 assembly
Jam2 assembly
Kng1 assembly
Kpna1 assembly
Krtap13 assembly
Krtap16-3 assembly
Krtap19-3 assembly
Krtap6-5 assembly
Litaf assembly
Lztr1 assembly
Tmem45a assembly
Nfkbiz assembly
Naa50 assembly
Masp1 assembly
Meltf assembly
Riox2 assembly
Mpv17l assembly
Mrpl39 assembly
Ncbp2 assembly
Nr1i2 assembly
Nrip1 assembly
Nde1 assembly
Opa1 assembly
Rwdd2b assembly
P2rx6 assembly
Pak2 assembly
Parn assembly
Pmm2 assembly
Ypel1 assembly
Nectin3 assembly
Rabl3 assembly
Retnla assembly
Retnlb assembly
Robo1 assembly
Ropn1 assembly
Samsn1 assembly
Sec22a assembly
St3gal6 assembly
Slc15a2 assembly
Socs1 assembly
Spag6l assembly
Ccdc80 assembly
Cd96 assembly
Tagln3 assembly
Tbca assembly
Tfg assembly
Tnfrsf17 assembly
Tnk2 assembly
Top3b assembly
Ube2v2 assembly
Umps assembly
Usp16 assembly
Usp25 assembly
Wrb assembly
Prodh assembly
Zbtb21 assembly
Zfp263 assembly
Slx4 assembly
Carhsp1 assembly
4930455F16Rik assembly
Trap1 assembly
4930455F16Rik assembly
Mgrn1 assembly
Coro7 assembly
Pam16 assembly
Dnaja3 assembly
Emp2 assembly
Nmral1 assembly
Hmox2 assembly
Cdip1 assembly
4930562C15Rik assembly
Nudt16l1 assembly
Anks3 assembly
4930451G09Rik assembly
Rogdi assembly
Glyr1 assembly
Dexi assembly
Grin2a assembly
Nubp1 assembly
Pla2g10 assembly
Prm1 assembly
Prm2 assembly
Ubn1 assembly
Gspt1 assembly
Ppl assembly
Ubn1 assembly
Eef2kmt assembly
1700123O21Rik assembly
Myh11 assembly
Ntan1 assembly
Mcm4 assembly
Prkdc assembly
Vpreb1 assembly
Mapk1 assembly
Tmem191c assembly
Ube2l3 assembly
Tssk1 assembly
Ess2 assembly
Slc25a1 assembly
Dgcr6 assembly
Zdhhc8 assembly
Dgcr8 assembly
Trmt2a assembly
Ranbp1 assembly
Arvcf assembly
Gnb1l assembly
Cldn5 assembly
Ufd1 assembly
Mrpl40 assembly
Iglv1 assembly
Bcl6 assembly
Abcc5 assembly
Abcc5 assembly
Alg3 assembly
Liph assembly
St6gal1 assembly
Sst assembly
Fgf12 assembly
Zfp148 assembly
Lsg1 assembly
Abcf3 assembly
Pcyt1a assembly
Casr assembly
Fstl1 assembly
Hgd assembly
Cd80 assembly
Spice1 assembly
Zbtb20 assembly
Gap43 assembly
Slc35a5 assembly
Morc1 assembly
Trmt10c assembly
Tomm70a assembly
Nit2 assembly
Htr1f assembly
Gabpa assembly
App assembly
Grik1 assembly
Sod1 assembly
Tiam1 assembly
Adamts5 assembly
Rcan1 assembly
Gart assembly
Dyrk1a assembly
Son assembly
Kcne1 assembly
Ifngr2 assembly
Cbr3 assembly
Ttc3 assembly
Ttc3 assembly
Kcnj6 assembly
Ets2 assembly
Hmgn1 assembly
Dscam assembly
Mx1 assembly
Notes
  • Reference
    The markers listed below for this experiment were mapped to mouse chromosomes based on sequence similarities to the Mouse Genome Sequencing Consortium (MGSC V3) assembly. Chromosomal locations were obtained from the Genome Exploration Research Group of the RIKEN Institute of Physical and Chemical Research in Japan. Where multiple RIKEN clones were associated to the same marker by sequence similarity clustering, mapping data were loaded only if all RIKEN clones from the same cluster mapped to the same mouse chromosome.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
09/17/2019
MGI 6.14
The Jackson Laboratory