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Gtpbp8 Gene Detail
Summary
  • Symbol
    Gtpbp8
  • Name
    GTP-binding protein 8 (putative)
  • Synonyms
    0610037H22Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1913317
    NCBI Gene: 66067
  • Alliance
    gene page
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    Chr16:44559242-44566726 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 16, 29.05 cM, cytoband B5
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    34 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1913317
 protein coding gene Chr16:44557131-44566726 (-)
129S1/SvImJ MGP_129S1SvImJ_G0022842
 protein coding gene Chr16:43503162-43512757 (-)
A/J MGP_AJ_G0022807
 protein coding gene Chr16:41554930-41564505 (-)
AKR/J MGP_AKRJ_G0022779
 protein coding gene Chr16:42881063-42890610 (-)
BALB/cJ MGP_BALBcJ_G0022808
 protein coding gene Chr16:41545787-41555342 (-)
C3H/HeJ MGP_C3HHeJ_G0022572
 protein coding gene Chr16:43083705-43093647 (-)
C57BL/6NJ MGP_C57BL6NJ_G0023255
 protein coding gene Chr16:44491692-44502684 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0020770
 protein coding gene Chr16:41594966-41604355 (-)
CAST/EiJ MGP_CASTEiJ_G0022098
 protein coding gene Chr16:43278334-43287852 (-)
CBA/J MGP_CBAJ_G0022543
 protein coding gene Chr16:46380615-46390211 (-)
DBA/2J MGP_DBA2J_G0022675
 protein coding gene Chr16:41287363-41297105 (-)
FVB/NJ MGP_FVBNJ_G0022650
 protein coding gene Chr16:41245140-41254882 (-)
LP/J MGP_LPJ_G0022743
 protein coding gene Chr16:43231458-43241003 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0022669
 protein coding gene Chr16:45759032-45769583 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0023270
 protein coding gene Chr16:42912340-42921935 (-)
PWK/PhJ MGP_PWKPhJ_G0021838
 protein coding gene Chr16:41666306-41675895 (-)
SPRET/EiJ MGP_SPRETEiJ_G0021669
 protein coding gene Chr16:42821085-42834319 (-)
WSB/EiJ MGP_WSBEiJ_G0022142
 protein coding gene Chr16:43007463-43017058 (-)



Homology
more
  • Human Ortholog
    GTPBP8, GTP binding protein 8 (putative)
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    GTPBP8, GTP binding protein 8 (putative)
  • Synonyms
    HSPC135
  • Links
    NCBI Gene ID: 29083
    neXtProt AC: NX_Q8N3Z3
    UniProt: Q8N3Z3

  • Chr Location
    3q13.2; chr3:112990984-113015060 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    5
  • GO References
    4
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    11
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 66067 NCBI Gene Model | MGI Sequence Detail 7485 C57BL/6J ±  kb
transcript NM_025332 RefSeq | MGI Sequence Detail 1318 C57BL/6  
polypeptide Q9CY28 UniProt | EBI | MGI Sequence Detail 285 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 11
    cDNA 11

    Microarray probesets 6
References
more
  • Summaries
    All 28
    Developmental Gene Expression 1
    Gene Ontology 4
    Phenotypes 3
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:332918 Cai S, et al., Transcriptomic analysis of the upper lip and primary palate development in mice. Front Genet. 2022;13:1039850
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory