2810407A14Rik Gene Detail

Summary

• Symbol
  2810407A14Rik
• Name
  RIKEN cDNA 2810407A14 gene

• Feature Type
  lncRNA gene
• IDs
  MGI:1917461
  NCBI Gene: 100039901
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr16:87619725-87669082 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, 50.01 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  1515 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1917461	lncRNA gene	Chr16:87580963-87707893 (+)
129S1/SvImJ	ENSMUSG00200038798	lncRNA gene	Chr16:84450508-84505697 (+)
A/J	ENSMUSG00195029812	lncRNA gene	Chr16:84259400-84314642 (+)
AKR/J	ENSMUSG00220016370	lncRNA gene	Chr16:84451368-84506577 (+)
BALB/cJ	ENSMUSG00180015884	lncRNA gene	Chr16:84331973-84387176 (+)
C3H/HeJ	ENSMUSG00175016940	lncRNA gene	Chr16:84667025-84722259 (+)
C57BL/6NJ	ENSMUSG00215036435	lncRNA gene	Chr16:84461369-84516611 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0005158	lincRNA gene	Chr16:82292315-82347508 (+)
CAST/EiJ	ENSTCUG00005020881	lncRNA gene	Chr16:84023360-84077154 (+)
CBA/J	ENSMUSG00210042834	lncRNA gene	Chr16:84557771-84612962 (+)
DBA/2J	ENSMUSG00185035386	lncRNA gene	Chr16:84511635-84566833 (+)
FVB/NJ	ENSMUSG00205030321	lncRNA gene	Chr16:84310567-84365818 (+)
JF1/MsJ	ENSUMUG00000046758	lncRNA gene	Chr16:84639315-84693130 (+)
LP/J	ENSMUSG00230035959	lncRNA gene	Chr16:87011562-87066744 (+)
NOD/ShiLtJ	ENSMUSG00190029947	lncRNA gene	Chr16:84476171-84531400 (+)
NZO/HlLtJ	ENSMUSG00225031238	lncRNA gene	Chr16:90200890-90256077 (+)
PWK/PhJ	ENSLUMG00010014512	lncRNA gene	Chr16:84286621-84346123 (+)
SPRET/EiJ	ENSMSPG00010033476	lncRNA gene	Chr16:85382633-85445970 (+)
WSB/EiJ	ENSIUOG00005021077	lncRNA gene	Chr16:84452573-84507772 (+)

Homology

• Gene Tree
  2810407A14Rik
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  7 phenotype references
  

• All Mutations and Alleles
  3
• Targeted
  2
• Genomic Mutations
  3 involving 2810407A14Rik
• Find Mice (IMSR)
  1 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  4

Tissue x Stage Matrix

• Other Mouse Links
  Allen Institute
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  40
• RefSeq
  5
• UniProt
  1

• Ensembl
  ENSMUSG00000055972 (Evidence)
• NCBI Gene
  100039901

Representative Sequences			Length	Strain/Species
genomic	100039901	NCBI Gene Model | MGI Sequence Detail	49358	C57BL/6J
transcript	AK153724	GenBank | ENA | DDBJ | MGI Sequence Detail	2173	C57BL/6J
polypeptide	Q8C9M5	UniProt | EBI | MGI Sequence Detail	120	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 4

  cDNA 4

  
  

  Microarray probesets 1

References

• Summaries
  All 17

  Phenotypes 7
• Earliest
  J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
• Latest
  J:361105 Tateossian H, et al., DYRK1A kinase triplication is the major cause of Otitis Media in Down Syndrome. Elife. 2025;

TSS for 2810407A14Rik:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr139241	Chr16:87620644-87620649 (+)	922 bp