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Krtap13-21 Gene Detail
Summary
  • Symbol
    Krtap13-21
  • Name
    keratin associated protein 13-21
  • Synonyms
    2310057N15Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1916946
    NCBI Gene: 69696
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr16:88570069-88571094 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 16, 51.40 cM, cytoband C3.3
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    27 from dbSNP Build 142
  • Strain Annotations
    16
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1916946
 protein coding gene Chr16:88570067-88571094 (-)
129S1/SvImJ MGP_129S1SvImJ_G0022993
 protein coding gene Chr16:89595004-89596128 (-)
A/J MGP_AJ_G0022961
 protein coding gene Chr16:85435049-85436076 (-)
AKR/J MGP_AKRJ_G0022931
 protein coding gene Chr16:88040993-88042018 (-)
BALB/cJ MGP_BALBcJ_G0022963
 protein coding gene Chr16:85968024-85968824 (-)
C3H/HeJ no annotation
C57BL/6NJ MGP_C57BL6NJ_G0023410
 protein coding gene Chr16:92473255-92474209 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0020914
 protein coding gene Chr16:83264839-83265816 (-)
CAST/EiJ MGP_CASTEiJ_G0022246
 protein coding gene Chr16:89037557-89038539 (-)
CBA/J no annotation
DBA/2J MGP_DBA2J_G0022827
 protein coding gene Chr16:85369213-85370111 (-)
FVB/NJ MGP_FVBNJ_G0022802
 protein coding gene Chr16:84461348-84462388 (-)
LP/J MGP_LPJ_G0022897
 protein coding gene Chr16:89274817-89275991 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0022822
 protein coding gene Chr16:100984040-100984892 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0023428
 protein coding gene Chr16:88534224-88535124 (-)
PWK/PhJ MGP_PWKPhJ_G0021990
 protein coding gene Chr16:85526572-85528197 (-)
SPRET/EiJ MGP_SPRETEiJ_G0021820
 protein coding gene Chr16:88091773-88092772 (-)
WSB/EiJ MGP_WSBEiJ_G0022295
 protein coding gene Chr16:88768855-88769719 (-)



Homology
more
  • Human Ortholog
    KRTAP13-2, keratin associated protein 13-2
  • Vertebrate Orthologs
    6
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    KRTAP13-2, keratin associated protein 13-2
  • Synonyms
    KAP13-2
  • Links
    NCBI Gene ID: 337959
    neXtProt AC: NX_Q52LG2
    UniProt: Q52LG2

  • Chr Location
    21q22.11; chr21:30371390-30372271 (-)  GRCh38
  • Human Ortholog
    KRTAP13-3, keratin associated protein 13-3
  • Synonyms
    KAP13.3
  • Links
    NCBI Gene ID: 337960
    neXtProt AC: NX_Q3SY46
    UniProt: Q3SY46

  • Chr Location
    21q22.11; chr21:30425380-30425926 (-)  GRCh38
  • Human Ortholog
    KRTAP13-4, keratin associated protein 13-4
  • Synonyms
    KAP13.4
  • Links
    NCBI Gene ID: 284827
    neXtProt AC: NX_Q3LI77
    UniProt: Q3LI77

  • Chr Location
    21q22.11; chr21:30430220-30431026 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    718
  • Tissues
    5
  • cDNA Data
    3
  • Literature Summary
    2
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 69696 NCBI Gene Model | MGI Sequence Detail 1026 C57BL/6J ±  kb
transcript NM_027170 RefSeq | MGI Sequence Detail 1026 C57BL/6  
polypeptide NP_081446 RefSeq | MGI Sequence Detail 200 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR007951 Keratin-associated protein, PMG type
Molecular
Reagents
less
  • All nucleic 4
    cDNA 3
    Primer pair 1

    Microarray probesets 2
References
more
  • Summaries
    All 21
    Developmental Gene Expression 2
    Phenotypes 6
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:335294 Redhead Y, et al., Craniofacial dysmorphology in Down syndrome is caused by increased dosage of Dyrk1a and at least three other genes. Development. 2023 Apr 15;150(8):dev201077
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/23/2024
MGI 6.23 		The Jackson Laboratory