1700007H22Rik Gene Detail

Summary

• Symbol
  1700007H22Rik
• Name
  RIKEN cDNA 1700007H22 gene
• Synonyms
  Gm49571

• Feature Type
  lncRNA gene
• IDs
  MGI:1922734
  NCBI Gene: 75484
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr16:85850011-85948088 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, Syntenic
• Mapping Data
  2 experiments

Strain
Comparison

• SNPs within 2kb
  3159 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1922734	lncRNA gene	Chr16:85850011-85948088 (-)
129S1/SvImJ	ENSMUSG00200038719	lncRNA gene	Chr16:82838429-82849802 (-)
A/J	ENSMUSG00195030878	lncRNA gene	Chr16:82634999-82646453 (-)
AKR/J	ENSMUSG00220016133	lncRNA gene	Chr16:82789808-82801255 (-)
BALB/cJ	ENSMUSG00180016326	lncRNA gene	Chr16:82668322-82679764 (-)
C3H/HeJ	ENSMUSG00175016901	lncRNA gene	Chr16:83010710-83022158 (-)
C57BL/6NJ	ENSMUSG00215031907	lncRNA gene	Chr16:82801618-82812996 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005021041	lncRNA gene	Chr16:82428162-82428555 (-)
CBA/J	ENSMUSG00210042339	lncRNA gene	Chr16:82894184-82905624 (-)
DBA/2J	ENSMUSG00185036047	lncRNA gene	Chr16:82846733-82858183 (-)
FVB/NJ	ENSMUSG00205029355	lncRNA gene	Chr16:82661391-82672845 (-)
JF1/MsJ	ENSUMUG00000047318	lncRNA gene	Chr16:82968834-82969227 (-)
LP/J	ENSMUSG00230035972	lncRNA gene	Chr16:85399575-85410940 (-)
NOD/ShiLtJ	ENSMUSG00190025925	lncRNA gene	Chr16:82851981-82863432 (-)
NZO/HlLtJ	ENSMUSG00225031245	lncRNA gene	Chr16:88524764-88536210 (-)
PWK/PhJ	ENSLUMG00010014240	lncRNA gene	Chr16:82615279-82615672 (-)
SPRET/EiJ	ENSMSPG00010031502	lncRNA gene	Chr16:83660098-83672238 (-)
WSB/EiJ	ENSIUOG00005020618	lncRNA gene	Chr16:82809529-82820970 (-)

Homology

• Gene Tree
  1700007H22Rik
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  7 phenotype references
  

• All Mutations and Alleles
  3
• Targeted
  2
• Genomic Mutations
  3 involving 1700007H22Rik
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  48

• Ensembl
  ENSMUSG00000116556 (Evidence)
• NCBI Gene
  75484

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000116556	Ensembl Gene Model | MGI Sequence Detail	98078	C57BL/6J
transcript	ENSMUST00000231250	Ensembl | MGI Sequence Detail	830	Not Applicable

Molecular
Reagents

• All nucleic 1

  cDNA 1

Other
Accession IDs

MGI:6214963

References

• Summaries
  All 13

  Phenotypes 7
• Earliest
  J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
• Latest
  J:361105 Tateossian H, et al., DYRK1A kinase triplication is the major cause of Otitis Media in Down Syndrome. Elife. 2025;