Mapping Data

Experiment

• Experiment
  TEXT-Physical Mapping
• Chromosome
  X
• Reference
  J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
• ID
  MGI:2449337

Genes

Gene	Assay Type
2010204K13Rik	assembly
Tceal1	assembly
Uxt	assembly
Tceal3	assembly
Arhgap36	assembly
Slc6a14	assembly
Xiap	assembly
Tceal7	assembly
Apoo	assembly
Atp1b4	assembly
Haus7	assembly
Ikbkg	assembly
Ogt	assembly
Srpx2	assembly
Lage3	assembly
Prr32	assembly
Nhsl2	assembly
1110065H08Rik	assembly
Sh3bgrl	assembly
Klhl13	assembly
Sash3	assembly
Rnf128	assembly
C1galt1c1	assembly
Fundc1	assembly
Eif1ax	assembly
Mcts1	assembly
Tceal6	assembly
Zcchc18	assembly
1500032P08Rik	assembly
Mecp2	assembly
Fthl17a	assembly
Morc4	assembly
Htatsf1	assembly
1600025M17Rik	assembly
Map7d2	assembly
Cypt3	assembly
Tcp11x2	assembly
1700010D01Rik	assembly
Fam236e	assembly
H2al1m	assembly
H2bw2	assembly
Btbd35f1	assembly
Fam236c	assembly
Tslrn1	assembly
1700020N15Rik	assembly
Ppp1r2-ps7	assembly
Tex13a	assembly
Ctag2	assembly
Dmrtc1a	assembly
1700036O09Rik	assembly
Cldn34b2	assembly
Rnf138rt1	assembly
H2ap	assembly
Wdr13	assembly
Actrt1	assembly
Vsig1	assembly
Samt3	assembly
Magea14	assembly
1700084M14Rik	assembly
Cypt15-ps	assembly
Dusp21	assembly
1700094I16Rik	assembly
1700111N16Rik	assembly
1700121L16Rik	assembly
Rhox13	assembly
Sh3kbp1	assembly
1700125M20Rik	assembly
Tmsb15a	assembly
Mospd1	assembly
2810403D21Rik	assembly
Las1l	assembly
1810030O07Rik	assembly
Fundc1	assembly
Fam3a	assembly
Trappc2	assembly
Jpx	assembly
Glod5	assembly
Prrg1	assembly
2010106E10Rik	assembly
Mageh1	assembly
Rap2c	assembly
2010204K13Rik	assembly
2010308F09Rik	assembly
Nbdy	assembly
Gprasp1	assembly
Dnase1l1	assembly
Tsr2	assembly
Mdrl	assembly
Asb12	assembly
Pir	assembly
Slc25a53	assembly
2310058F05Rik	assembly
Pof1b	assembly
Bclaf3	assembly
Pdzd11	assembly
Mageb16	assembly
Mospd2	assembly
Jpx	assembly
Rbm3	assembly
Htatsf1	assembly
Pdk3	assembly
Chmp1b2	assembly
2610007B07Rik	assembly
Hdac8	assembly
Stk26	assembly
Nkap	assembly
Ribc1	assembly
Pbdc1	assembly
Vma21	assembly
Wdr44	assembly
2610510C17Rik	assembly
Rps6ka6	assembly
Magt1	assembly
Phf6	assembly
Mir503hg	assembly
Utp14a	assembly
Htatsf1	assembly
Vcf2	assembly
Bhlhb9	assembly
Pdzd11	assembly
Amer1	assembly
Zcchc12	assembly
Alg13	assembly
Slc25a53	assembly
2810403D21Rik	assembly
Zfp711	assembly
Rbmx2	assembly
Rnf113a1	assembly
Kantr	assembly
Magt1	assembly
Map7d2	assembly
Rbm3os	assembly
2900005I04Rik	assembly
Bcor	assembly
2900011F02Rik	assembly
2900054C01Rik	assembly
Kantr	assembly
Panct1	assembly
Arxes2	assembly
Gria3	assembly
2900075N08Rik	assembly
3010001F23Rik	assembly
Tmem47	assembly
Armcx1	assembly
Gprasp1	assembly
Mid1ip1	assembly
3110056K14Rik	assembly
3110067C02Rik	assembly
Gpr173	assembly
Armcx2	assembly
Magea9	assembly
Tceal8	assembly
Pabir2	assembly
2810403D21Rik	assembly
4732460I02Rik	assembly
4732468M13Rik	assembly
Trmt2b	assembly
Ogt	assembly
Atrx	assembly
Fundc2	assembly
Alg13	assembly
Maged2	assembly
Tbc1d8b	assembly
Fam47c	assembly
4921511E18Rik	assembly
Samt1b	assembly
Dmrtc1a	assembly
Tab3	assembly
Cylc1	assembly
Ppp1r2-ps9	assembly
Satl1	assembly
Vsig1	assembly
Cldn34c4	assembly
Ssxb1	assembly
4930422N03Rik	assembly
Pabir3	assembly
4930447F04Rik	assembly
Nxf2	assembly
Cldn34d	assembly
4930480E11Rik	assembly
4930500G05Rik	assembly
4930503H13Rik	assembly
4930513O06Rik	assembly
4930515L19Rik	assembly
4930519F16Rik	assembly
Flicr	assembly
Samt2b	assembly
Pabir3	assembly
Pramex1	assembly
Ints6l	assembly
Samt4	assembly
4930544C05Rik	assembly
Magea13	assembly
4930554N03Rik	assembly
4930555B12Rik	assembly
H2al3	assembly
4930558G05Rik	assembly
Tex11	assembly
4930570D08Rik	assembly
Dipk2b	assembly
Arhgef6	assembly
4931400O07Rik	assembly
Cypt1	assembly
Phf6	assembly
Lonrf3	assembly
Scml2	assembly
Fam90a1b	assembly
Capza1b	assembly
4933401B06Rik	assembly
Magec2	assembly
Tex13b	assembly
Tex16	assembly
Zxda	assembly
Efhc2	assembly
4933407K13Rik	assembly
4933416E14Rik	assembly
Arl13a	assembly
Map7d3	assembly
4933428M09Rik	assembly
4933434C23Rik	assembly
4933436I01Rik	assembly
Tafazzin	assembly
Zrsr2	assembly
Dock11	assembly
5033418A18Rik	assembly
Map7d2	assembly
5330434G04Rik	assembly
Gprasp2	assembly
5430402E10Rik	assembly
Tasl	assembly
5430428K19Rik	assembly
5530601H04Rik	assembly
Morc4	assembly
Atp6ap2	assembly
5730405O15Rik	assembly
5730407O05Rik	assembly
5730412P04Rik	assembly
5730416F02Rik	assembly
5730419A17Rik	assembly
Lonrf3	assembly
Lpar4	assembly
Smarca1	assembly
Upf3b	assembly
P2ry10	assembly
5830417A05Rik	assembly
Firre	assembly
Las1l	assembly
Gab3	assembly
Apln	assembly
Zdhhc15	assembly
6030498E09Rik	assembly
Usp11	assembly
Smim10l2a	assembly
Thoc2	assembly
Klhl15	assembly
Phka2	assembly
Ints6l	assembly
Il1rapl1	assembly
Vcf2	assembly
Tbc1d25	assembly
Rab39b	assembly
Zfp182	assembly
Atp2b3	assembly
Slc9a6	assembly
Arxes1	assembly
6530403M18Rik	assembly
Gpr165	assembly
Bcorl1	assembly
Apool	assembly
Tspan6	assembly
Car5b	assembly
Bcor	assembly
Chmp1b2	assembly
8430425A16Rik	assembly
8430439B09Rik	assembly
Xpnpep2	assembly
Zmym3	assembly
Tmem35a	assembly
Tbc1d8b	assembly
Tafazzin	assembly
Gdpd2	assembly
9230113A04Rik	assembly
Fate1	assembly
9330119M13Rik	assembly
9330168M11Rik	assembly
Rab9b	assembly
9430014K20Rik	assembly
Dach2	assembly
Nkrf	assembly
Mir503hg	assembly
Eda2r	assembly
9430082L08Rik	assembly
Apool	assembly
Pwwp3b	assembly
Ocrl	assembly
Zfp449	assembly
9530051G07Rik	assembly
9530062E16Rik	assembly
Kctd12b	assembly
Gpc4	assembly
Zdhhc9	assembly
Mbtps2	assembly
Arhgef9	assembly
Spin4	assembly
Mmgt1	assembly
Phka1	assembly
Phf8	assembly
Dcaf12l2	assembly
Arhgap4	assembly
Zc3h12b	assembly
4933407K13Rik	assembly
Dcaf12l1	assembly
A230058F20Rik	assembly
A230072C01Rik	assembly
Nlgn3	assembly
Pcdh11x	assembly
Syp	assembly
A230106O10Rik	assembly
Atp11c	assembly
Yipf6	assembly
Arhgap4	assembly
Mbnl3	assembly
Slc9a7	assembly
A630012P03Rik	assembly
P2ry10b	assembly
Sertm2	assembly
Klf8	assembly
Akap17b	assembly
A130057A22Rik	assembly
Acot9	assembly
Ace2	assembly
Radx	assembly
Kif4	assembly
Ctps2	assembly
6330509M05Rik	assembly
Nxt2	assembly
Tfe3	assembly
Ap1s2	assembly
Ammecr1	assembly
Ap1s2	assembly
Apln	assembly
Naa10	assembly
Arhgef6	assembly
Asb11	assembly
Asb9	assembly
Bmp15	assembly
Taf1	assembly
Acsl4	assembly
Lonrf3	assembly
Med14	assembly
Firre	assembly
Gemin8	assembly
Mcf2	assembly
B230118I11Rik	assembly
B230119M05Rik	assembly
Ftx	assembly
Akap17b	assembly
B230340J04Rik	assembly
Kctd12b	assembly
Adgrg2	assembly
B930008F14Rik	assembly
Zmat1	assembly
Bcorl1	assembly
B930042K01Rik	assembly
Gemin8	assembly
Bcap31	assembly
Bmx	assembly
Brs3	assembly
C030001C17Rik	assembly
C030023E24Rik	assembly
C030034E14Rik	assembly
Map7d2	assembly
Heph	assembly
Klhl4	assembly
Ophn1	assembly
Mpp1	assembly
C230067J06Rik	assembly
Steep1	assembly
Platr21	assembly
C430004N12Rik	assembly
Huwe1	assembly
Apex2	assembly
Mir503hg	assembly
Brcc3	assembly
Shroom2	assembly
Cstf2	assembly
Nexmif	assembly
Septin6	assembly
Chm	assembly
Chst7	assembly
Cldn2	assembly
Zcchc13	assembly
Med14	assembly
Ctps2	assembly
Cul4b	assembly
Cysltr1	assembly
D030036P13Rik	assembly
Brwd3	assembly
Fam50a	assembly
Klhl13	assembly
Pdzd4	assembly
Tbx22	assembly
D230050J18Rik	assembly
Ercc6l	assembly
Rbm41	assembly
Mecp2	assembly
Car5b	assembly
D830012I24Rik	assembly
Fam120c	assembly
Clcn5	assembly
Gk	assembly
Bcor	assembly
Slitrk4	assembly
Dcx	assembly
Drp2	assembly
E030036C24Rik	assembly
Zbtb33	assembly
E130102C15Rik	assembly
Apool	assembly
E130114A11Rik	assembly
Amot	assembly
E430013K19Rik	assembly
Diaph2	assembly
Mbnl3	assembly
Rbm10	assembly
Etd	assembly
Flna	assembly
Tsc22d3	assembly
Gpm6b	assembly
Gpr34	assembly
Gpr82	assembly
Rlim	assembly
Hsd17b10	assembly
Hccs	assembly
Hs6st2	assembly
Igbp1	assembly
Il1rapl2	assembly
Itgb1bp2	assembly
Itm2a	assembly
Kcne5	assembly
Magee1	assembly
Cd99l2	assembly
Morf4l2	assembly
Msn	assembly
Ndufa1	assembly
Nudt11	assembly
Cltrn	assembly
Obp1a	assembly
Tenm1	assembly
P2ry4	assembly
Pak3	assembly
Pcsk1n	assembly
Pfkfb1	assembly
Plxnb3	assembly
Porcn	assembly
Prkx	assembly
Psmd10	assembly
Rhox6	assembly
Rhox9	assembly
Rab9	assembly
Rbbp7	assembly
Rbmx	assembly
Rp2	assembly
Rpgr	assembly
Trappc2	assembly
Septin6	assembly
Sh2d1a	assembly
Sh3kbp1	assembly
Slc6a14	assembly
Smc1a	assembly
Smpx	assembly
Snx12	assembly
Srpx	assembly
Stag2	assembly
Srpk3	assembly
Syap1	assembly
Sytl4	assembly
Taf7l	assembly
Dynlt3	assembly
Tspan7	assembly
Tnmd	assembly
Tro	assembly
Huwe1	assembly
Usp26	assembly
Uxt	assembly
Tceal9	assembly
Wdr13	assembly
Clcn5	assembly
Usp27x	assembly
Ccdc22	assembly
Syp	assembly
Akap4	assembly
Wdr45	assembly
Praf2	assembly
Gpkow	assembly
Ccdc120	assembly
Prickle3	assembly
Magix	assembly
Suv39h1	assembly
Otud5	assembly
Ebp	assembly
Ftsj1	assembly
Pim2	assembly
Pqbp1	assembly
Slc35a2	assembly
Timm17b	assembly
Kcnd1	assembly
Cybb	assembly
Otc	assembly
Maoa	assembly
Maob	assembly
Usp9x	assembly
Araf	assembly
Elk1	assembly
Syn1	assembly
Agtr2	assembly
Slc25a5	assembly
Lamp2	assembly
Slc25a14	assembly
Plac1	assembly
Hprt1	assembly
Fmr1	assembly
Mtm1	assembly
Cetn2	assembly
Nsdhl	assembly
Zfp185	assembly
F8a	assembly
Zfp275	assembly
Abcd1	assembly
Idh3g	assembly
Avpr2	assembly
Renbp	assembly
Hcfc1	assembly
Irak1	assembly
Gdi1	assembly
Ubl4a	assembly
Vbp1	assembly
Tbl1x	assembly
Dmd	assembly
Eif2s3x	assembly
Gk	assembly
Pola1	assembly
Maged1	assembly
Zfx	assembly
Pja1	assembly
Eda	assembly
Abcb7	assembly
Gjb1	assembly
Xist	assembly
Tsx	assembly
Chic1	assembly
Nap1l2	assembly
Atrx	assembly
Atp7a	assembly
Rlim	assembly
Dach2	assembly
Gla	assembly
Nrk	assembly
Bex3	assembly
Bex1	assembly
Irs4	assembly
Prps1	assembly
Mid2	assembly
Col4a5	assembly
Alas2	assembly
Trpc5	assembly
Tspyl2	assembly
Kdm5c	assembly
Gpr143	assembly
Sat1	assembly
Htr2c	assembly
Prdx4	assembly
Grpr	assembly
Piga	assembly
Egfl6	assembly
Prps2	assembly
Tmsb4x	assembly

Notes

• Reference
  The markers listed below for this experiment were mapped to mouse chromosomes based on sequence similarities to the Mouse Genome Sequencing Consortium (MGSC V3) assembly. Chromosomal locations were obtained from the Genome Exploration Research Group of the RIKEN Institute of Physical and Chemical Research in Japan. Where multiple RIKEN clones were associated to the same marker by sequence similarity clustering, mapping data were loaded only if all RIKEN clones from the same cluster mapped to the same mouse chromosome.