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H2bw2 Gene Detail
Summary
  • Symbol
    H2bw2
  • Name
    H2B.W histone 2
  • Synonyms
    1700014N06Rik, H2bfm, H2BL2
  • Feature Type
    protein coding gene
  • IDs
    MGI:1916639
    NCBI Gene: 69389
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    ChrX:135828074-135829122 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome X, 59.10 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    9 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1916639
 protein coding gene ChrX:135828074-135829125 (+)
129S1/SvImJ MGP_129S1SvImJ_G0036107
 protein coding gene ChrX:134330894-134331945 (+)
A/J MGP_AJ_G0036088
 protein coding gene ChrX:133740245-133741296 (+)
AKR/J MGP_AKRJ_G0036012
 protein coding gene ChrX:138028639-138029690 (+)
BALB/cJ MGP_BALBcJ_G0036077
 protein coding gene ChrX:132136621-132137672 (+)
C3H/HeJ MGP_C3HHeJ_G0035786
 protein coding gene ChrX:134394181-134395232 (+)
C57BL/6NJ MGP_C57BL6NJ_G0036601
 protein coding gene ChrX:138260841-138261892 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0033428
 protein coding gene ChrX:125676808-125677889 (+)
CAST/EiJ MGP_CASTEiJ_G0035074
 protein coding gene ChrX:115158605-115159656 (+)
CBA/J MGP_CBAJ_G0035762
 protein coding gene ChrX:142500325-142501376 (+)
DBA/2J MGP_DBA2J_G0035919
 protein coding gene ChrX:133031011-133032062 (+)
FVB/NJ MGP_FVBNJ_G0035853
 protein coding gene ChrX:132240106-132241157 (+)
LP/J MGP_LPJ_G0036013
 protein coding gene ChrX:135313382-135314433 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0035889
 protein coding gene ChrX:149797885-149798936 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0036638
 protein coding gene ChrX:133716345-133717396 (+)
PWK/PhJ MGP_PWKPhJ_G0034767
 protein coding gene ChrX:112194371-112195329 (+)
SPRET/EiJ MGP_SPRETEiJ_G0034595
 protein coding gene ChrX:115791344-115792395 (+)
WSB/EiJ MGP_WSBEiJ_G0035209
 protein coding gene ChrX:132031188-132032239 (+)



Homology
more
  • Human Ortholog
    H2BW1, H2B.W histone 1
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    H2BW1, H2B.W histone 1
  • Synonyms
    H2BFWT, TH2B-175
  • Links
    NCBI Gene ID: 158983
    neXtProt AC: NX_Q7Z2G1
    UniProt: Q7Z2G1

  • Chr Location
    Xq22.2; chrX:104011147-104013708 (-)  GRCh38
  • Human Ortholog
    H2BW2, H2B.W histone 2
  • Synonyms
    H2BFM, H2BM, H2B/s
  • Links
    NCBI Gene ID: 286436
    neXtProt AC: NX_P0C1H6
    UniProt: P0C1H6

  • Chr Location
    Xq22.2; chrX:104039956-104042454 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    5
  • GO References
    2
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    5
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 69389 NCBI Gene Model | MGI Sequence Detail 1049 C57BL/6J ±  kb
transcript NM_027067 RefSeq | MGI Sequence Detail 1049 C57BL/6  
polypeptide NP_081343 RefSeq | MGI Sequence Detail 224 C57BL/6  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 5
    cDNA 5

    Microarray probesets 2
References
more
  • Summaries
    All 19
    Gene Ontology 2
    Phenotypes 2
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory