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1700121L16Rik Gene Detail
Summary
  • Symbol
    1700121L16Rik
  • Name
    RIKEN cDNA 1700121L16 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1923893
    NCBI Gene: 76643
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    ChrX:103860382-103886061 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome X, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    46 from dbSNP Build 142
  • Strain Annotations
    16
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1923893
 lncRNA gene ChrX:103860382-103886061 (+)
129S1/SvImJ MGP_129S1SvImJ_G0007557
 lincRNA gene ChrX:101556704-101581982 (+)
A/J MGP_AJ_G0007556
 lincRNA gene ChrX:101405108-101429380 (+)
AKR/J MGP_AKRJ_G0007526
 lincRNA gene ChrX:104557060-104585500 (+)
BALB/cJ MGP_BALBcJ_G0007530
 lincRNA gene ChrX:100225263-100234245 (+)
C3H/HeJ MGP_C3HHeJ_G0007477
 lincRNA gene ChrX:102021938-102030894 (+)
C57BL/6NJ MGP_C57BL6NJ_G0007703
 lincRNA gene ChrX:104486649-104516484 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0006880
 lincRNA gene ChrX:98963144-98982670 (+)
CAST/EiJ MGP_CASTEiJ_G0007379
 lincRNA gene ChrX:86237003-86248700 (+)
CBA/J MGP_CBAJ_G0007458
 lincRNA gene ChrX:107780642-107809873 (+)
DBA/2J MGP_DBA2J_G0007483
 lincRNA gene ChrX:100692687-100701736 (+)
FVB/NJ MGP_FVBNJ_G0007499
 lincRNA gene ChrX:99975816-100002052 (+)
LP/J MGP_LPJ_G0007563
 lincRNA gene ChrX:102523016-102547120 (+)
NOD/ShiLtJ no annotation
NZO/HlLtJ MGP_NZOHlLtJ_G0007706
 lincRNA gene ChrX:101221765-101246451 (+)
PWK/PhJ no annotation
SPRET/EiJ MGP_SPRETEiJ_G0007221
 lincRNA gene ChrX:86979851-86988593 (-)
WSB/EiJ MGP_WSBEiJ_G0007440
 lincRNA gene ChrX:99919348-99943759 (+)



Homology
less
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    1
Sequences &
Gene Models
less
  • All Sequences
    22
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 76643 NCBI Gene Model | MGI Sequence Detail 25680 C57BL/6J ±  kb
transcript NR_045453 RefSeq | MGI Sequence Detail 561 ZRU/MplStud  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1

    Microarray probesets 1
References
more
  • Summaries
    All 9
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory