2810403D21Rik Gene Detail

Summary

• Symbol
  2810403D21Rik
• Name
  RIKEN cDNA 2810403D21 gene
• Synonyms
  1810022M18Rik, 4632410B05Rik

• Feature Type
  lncRNA gene
• IDs
  MGI:1917214
  NCBI Gene: 69964
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  ChrX:107878084-107930502 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 47.90 cM
• Mapping Data
  2 experiments

Strain
Comparison

• SNPs within 2kb
  1095 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1917214	lncRNA gene	ChrX:107876948-108021669 (+)
129S1/SvImJ	ENSMUSG00200039252	lncRNA gene	ChrX:89687156-89828267 (+)
A/J	ENSMUSG00195026563	lncRNA gene	ChrX:93391799-93532745 (+)
AKR/J	ENSMUSG00220039745	lncRNA gene	ChrX:88129479-88270595 (+)
BALB/cJ	ENSMUSG00180044733	lncRNA gene	ChrX:90057806-90198747 (+)
C3H/HeJ	ENSMUSG00175028975	lncRNA gene	ChrX:93633579-93774502 (+)
C57BL/6NJ	ENSMUSG00215047607	lncRNA gene	ChrX:90286976-90428094 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0013903	unclassified non-coding RNA gene	ChrX:102602520-102747995 (+)
CAST/EiJ	ENSTCUG00005043084	lncRNA gene	ChrX:91078345-91225122 (+)
CBA/J	ENSMUSG00210045843	lncRNA gene	ChrX:90532439-90673371 (+)
DBA/2J	ENSMUSG00185030056	lncRNA gene	ChrX:103011800-103152916 (+)
FVB/NJ	ENSMUSG00205041174	lncRNA gene	ChrX:89633652-89774602 (+)
JF1/MsJ	ENSUMUG00000017313	lncRNA gene	ChrX:123606042-123735572 (+)
LP/J	ENSMUSG00230043548	lncRNA gene	ChrX:109657568-109798676 (+)
NOD/ShiLtJ	ENSMUSG00190041299	lncRNA gene	ChrX:89759801-89900902 (+)
NZO/HlLtJ	ENSMUSG00225040773	lncRNA gene	ChrX:114812531-114953405 (+)
PWK/PhJ	ENSLUMG00010040230	lncRNA gene	ChrX:88870245-88998554 (+)
SPRET/EiJ	ENSMSPG00010022360	lncRNA gene	ChrX:93185103-93332248 (+)
WSB/EiJ	ENSIUOG00005044441	lncRNA gene	ChrX:90163181-90304302 (+)

Homology

• Gene Tree
  2810403D21Rik
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  2
• Gene trapped
  2
• Find Mice (IMSR)
  2 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  10

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  159
• RefSeq
  1

• Ensembl
  ENSMUSG00000086629 (Evidence)
• NCBI Gene
  69964

Representative Sequences			Length	Strain/Species
genomic	69964	NCBI Gene Model | MGI Sequence Detail	52419	C57BL/6J
transcript	NR_015493	RefSeq | MGI Sequence Detail	1005	C57BL/6

Molecular
Reagents

• All nucleic 13

  cDNA 13

  
  

  Microarray probesets 2

Other
Accession IDs

MGI:1916383, MGI:1925509, MGI:3034786

References

• Summaries
  All 19

  Phenotypes 3
• Earliest
  J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
• Latest
  J:314543 Liang H, et al., LncRNA 2810403D21Rik/Mirf promotes ischemic myocardial injury by regulating autophagy through targeting Mir26a. Autophagy. 2020 Jun;16(6):1077-1091

TSS for 2810403D21Rik:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr161840	ChrX:107878256-107878318 (+)	203 bp