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5730405O15Rik Gene Detail
Summary
  • Symbol
    5730405O15Rik
  • Name
    RIKEN cDNA 5730405O15 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1917739
    NCBI Gene: 70489
  • Alliance
    genome feature page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    ChrX:12908254-12911534 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome X, 7.92 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    114 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1917739
 lncRNA gene ChrX:12907989-12920555 (+)
129S1/SvImJ ENSMUSG00200034551
 lncRNA gene ChrX:7651812-7655359 (+)
A/J ENSMUSG00195042084
 lncRNA gene ChrX:7624101-7627648 (+)
AKR/J ENSMUSG00220035491
 lncRNA gene ChrX:7160829-7164376 (+)
BALB/cJ ENSMUSG00180030508
 lncRNA gene ChrX:7623552-7627100 (+)
C3H/HeJ ENSMUSG00175035615
 lncRNA gene ChrX:7648721-7652268 (+)
C57BL/6NJ ENSMUSG00215041134
 lncRNA gene ChrX:8286706-8290253 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0013889
 unclassified non-coding RNA gene ChrX:6899855-6903265 (+)
CAST/EiJ ENSTCUG00005035362
 lncRNA gene ChrX:7619837-7623359 (+)
CBA/J ENSMUSG00210039325
 lncRNA gene ChrX:7697999-7701546 (+)
DBA/2J ENSMUSG00185036507
 lncRNA gene ChrX:14287244-14290791 (+)
FVB/NJ ENSMUSG00205036959
 lncRNA gene ChrX:7359872-7363419 (+)
JF1/MsJ ENSUMUG00000042959
 lncRNA gene ChrX:28145404-28148933 (+)
LP/J ENSMUSG00230032686
 lncRNA gene ChrX:18870341-18873888 (+)
NOD/ShiLtJ ENSMUSG00190043997
 lncRNA gene ChrX:7647186-7650733 (+)
NZO/HlLtJ ENSMUSG00225034082
 lncRNA gene ChrX:24077692-24081239 (+)
PWK/PhJ ENSLUMG00010036348
 lncRNA gene ChrX:7533502-7537035 (+)
SPRET/EiJ ENSMSPG00010025017
 lncRNA gene ChrX:8502010-8505545 (+)
WSB/EiJ ENSIUOG00005016996
 lncRNA gene ChrX:4332075-4335622 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
  • cDNA Data
    6
Sequences &
Gene Models
less
  • All Sequences
    30
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 70489 NCBI Gene Model | MGI Sequence Detail 3281 C57BL/6J ±  kb
transcript NR_038158 RefSeq | MGI Sequence Detail 887 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 6
    cDNA 6

    Microarray probesets 1
References
more
  • Summaries
    All 16
    Phenotypes 4
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/15/2026
MGI 6.29 		The Jackson Laboratory