D830012I24Rik Gene Detail

Summary

• Symbol
  D830012I24Rik
• Name
  RIKEN cDNA D830012I24 gene

• Feature Type
  lncRNA gene
• IDs
  MGI:2443279
• Alliance
  gene page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  ChrX:103552018-103555833 bp, + strand

  From MGI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  127 from dbSNP Build 142

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	no annotation
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Expression

• cDNA Data
  8

Sequences &
Gene Models

• All Sequences
  2

Representative Sequences			Length	Strain/Species
transcript	AK052864	GenBank | ENA | DDBJ | MGI Sequence Detail	3817	C57BL/6J

Molecular
Reagents

• All nucleic 8

  cDNA 8

References

• Summaries
  All 3
• Earliest
  J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573

TSS for D830012I24Rik:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr161739	ChrX:103550288-103550305 (+)	-1,721 bp
Tssr161740	ChrX:103552509-103552523 (+)	498 bp