Mapping Data

Experiment

• Experiment
  TEXT-Physical Mapping
• Chromosome
  5
• Reference
  J:78475 Mouse Genome Informatics Scientific Curators, Chromosome assignment of mouse genes using the Mouse Genome Sequencing Consortium (MGSC) assembly and the ENSEMBL Database. 2002;
• ID
  MGI:2385479

Genes

Gene	Assay Type
Sri	assembly
Tex47	assembly
Crot	assembly
Cldn12	assembly
Pclo	assembly
Akap9	assembly
Speer4c1	assembly
Gatad1	assembly
Fam133b	assembly
Speer3	assembly
Pex1	assembly
Sema3d	assembly
Tmbim7	assembly
1700109H08Rik	assembly
Magi2	assembly
Paxip1	assembly
Tomm7	assembly
Fastk	assembly
Smarcd3	assembly
2700038G22Rik	assembly
Armc10	assembly
2900005J15Rik	assembly
Galntl5	assembly
Wdr86	assembly
Kmt2e	assembly
1500035N22Rik	assembly
Speer4f1	assembly
Prkag2os1	assembly
Rbm33	assembly
Pmpcb	assembly
Speer4b	assembly
Ccdc146	assembly
4930584F24Rik	assembly
Tmub1	assembly
Lhfpl3	assembly
Xrcc2	assembly
Slc26a5	assembly
Hycc1	assembly
Asb10	assembly
Slc5a1	assembly
Slbp	assembly
Ywhah	assembly
Ctbp1	assembly
Dnajb6	assembly
Trim54	assembly
Otof	assembly
Maea	assembly
Ccdc121	assembly
Ift172	assembly
Ost4	assembly
Mfsd10	assembly
Tmem129	assembly
Cad	assembly
Afap1	assembly
Selenoi	assembly
Uvssa	assembly
Supt7l	assembly
Cib4	assembly
Cimip2c	assembly
Slc35f6	assembly
Plb1	assembly
Nop14	assembly
Plb1	assembly
Htra3	assembly
Trmt44	assembly
Abhd1	assembly
Acox3	assembly
Tcf23	assembly
Mrpl33	assembly
Eif2b4	assembly
Man2b2	assembly
Ccdc96	assembly
Rab28	assembly
Zbtb49	assembly
2210406O10Rik	assembly
Stk32b	assembly
Pacrgl	assembly
D5Ertd615e	assembly
Ncapg	assembly
Fam184b	assembly
Kcnip4	assembly
Dhx15	assembly
Ppargc1a	assembly
Pi4k2b	assembly
Anapc4	assembly
Zcchc4	assembly
Pgm2	assembly
Fam114a1	assembly
Pds5a	assembly
Nwd2	assembly
Lias	assembly
Lnx1	assembly
Fip1l1	assembly
Gnpda2	assembly
Rasl11b	assembly
Ociad2	assembly
Nsun7	assembly
Chic2	assembly
Rhoh	assembly
Yipf7	assembly
Nfxl1	assembly
Tmem33	assembly
9430027B09Rik	assembly
Cox7b2	assembly
Paics	assembly
Exoc1	assembly
2310040G07Rik	assembly
Cracd	assembly
Spmap2l	assembly
Stap1	assembly
Dck	assembly
Smr3a	assembly
Smr2	assembly
Prol1	assembly
Enam	assembly
Mob1b	assembly
Mthfd2l	assembly
Odam	assembly
Cabs1	assembly
Amtn	assembly
Epgn	assembly
Ugt2a3	assembly
Rassf6	assembly
Prr27	assembly
2310003L06Rik	assembly
Slc4a4	assembly
Ankrd17	assembly
Ugt2b37	assembly
Ugt2a1	assembly
Hnrnpd	assembly
Scarb2	assembly
Ppef2	assembly
Shroom3	assembly
Cxcl13	assembly
Naaa	assembly
Mrpl1	assembly
Mrps18c	assembly
Sec31a	assembly
Coq2	assembly
Antxr2	assembly
Nup54	assembly
4930405H06Rik	assembly
1700010H22Rik	assembly
4930522N08Rik	assembly
4930524J08Rik	assembly
2010109A12Rik	assembly
Prdm8	assembly
Uso1	assembly
U90926	assembly
Bmp2k	assembly
Mapk10	assembly
Zfp33b	assembly
4921523P09Rik	assembly
1700016H13Rik	assembly
Arhgap24	assembly
Gbp8	assembly
Mepe	assembly
Hsd17b11	assembly
Vmn2r10	assembly
Brdt	assembly
Dipk1a	assembly
Tmed11	assembly
Lpcat2b	assembly
Ccdc18	assembly
Ube2d2b	assembly
Tmed5	assembly
Srsf9	assembly
Cit	assembly
Rpl6	assembly
Hrk	assembly
Atxn2	assembly
Mapkapk5	assembly
Prkab1	assembly
Ncor2	assembly
P2rx7	assembly
Oasl2	assembly
Coro1c	assembly
Hip1r	assembly
Cabp1	assembly
Kdm2b	assembly
Chek2	assembly
Dynll1	assembly
Abcb9	assembly
Rsrc2	assembly
Mrps17	assembly
Ndufa12	assembly
Diablo	assembly
Psmd9	assembly
Ddx55	assembly
Sumf2	assembly
Tctn2	assembly
Gpn3	assembly
Denr	assembly
Svop	assembly
Fam216a	assembly
Srrm4	assembly
Nupr2	assembly
Srrd	assembly
Zcchc8	assembly
Cfap251	assembly
Tmem248	assembly
Ankle2	assembly
Acad10	assembly
Rfc5	assembly
4930519G04Rik	assembly
2210016L21Rik	assembly
Brap	assembly
Pgam5	assembly
Mtrfr	assembly
Erp29	assembly
Asphd2	assembly
Rflna	assembly
1700069L16Rik	assembly
Sgsm1	assembly
4930405N21Rik	assembly
Rbm19	assembly
4932422M17Rik	assembly
Myo18b	assembly
Sppl3	assembly
Ogfod2	assembly
Morn3	assembly
Mphosph9	assembly
4930562A09Rik	assembly
4930565B19Rik	assembly
4930557B06Rik	assembly
Ep400	assembly
Rilpl1	assembly
Fbxw8	assembly
Snrnp35	assembly
Tesc	assembly
Il31	assembly
Gatc	assembly
Nos1	assembly
Spring1	assembly
Bri3bp	assembly
Bcl7a	assembly
Tmem116	assembly
Mmab	assembly
Tchp	assembly
4930569F06Rik	assembly
4930430O22Rik	assembly
Aacs	assembly
Trpv4	assembly
Pitpnb	assembly
Pus1	assembly
Rabgef1	assembly
Rilpl2	assembly
Caln1	assembly
Rplp0	assembly
Myl2	assembly
Zfp11	assembly
Nudt1	assembly
Polr2j	assembly
Ap1s1	assembly
Mcm7	assembly
Ap4m1	assembly
Zfp68	assembly
Sh2b2	assembly
Cops6	assembly
Myl10	assembly
Fis1	assembly
Prkrip1	assembly
Ift22	assembly
Mrm2	assembly
Ints1	assembly
Upk3bl	assembly
Znhit1	assembly
Fbxo24	assembly
Alkbh4	assembly
Auts2	assembly
Srrm3	assembly
Iqce	assembly
Por	assembly
4731417B20Rik	assembly
1700123K08Rik	assembly
Hip1	assembly
Gper1	assembly
Tsc22d4	assembly
Sun1	assembly
Hip1	assembly
5930429A01Rik	assembly
Grifin	assembly
4930432F04Rik	assembly
Ccl24	assembly
Zfp113	assembly
Srrm3	assembly
Col26a1	assembly
Gpr146	assembly
Castor2	assembly
Usp12	assembly
Rnf216	assembly
Nptx2	assembly
Gtf3a	assembly
Ankrd61	assembly
Kdelr2	assembly
Zkscan14	assembly
Fam220a	assembly
Fam220a	assembly
Tecpr1	assembly
Ptcd1	assembly
Pan3	assembly
Zdhhc4	assembly
Spdye4a	assembly
Rsph10b	assembly
Smurf1	assembly
Usp42	assembly
Rbak	assembly
Atp5mf	assembly
Papolb	assembly
Bri3	assembly
Lnx2	assembly
Grid2ip	assembly
Alox5ap	assembly
Pomp	assembly
Rfc3	assembly
1810059H22Rik	assembly
Medag	assembly
Slc46a3	assembly
Wdr95	assembly
Tex26	assembly
Mtus2	assembly
D730045B01Rik	assembly
Gpr12	assembly
Cdk2ap1	assembly
Nipsnap2	assembly
Abcf2	assembly
Iscu	assembly
Wsb2	assembly
Ppp1cb	assembly
Mtf2	assembly
Nkx6-1	assembly
Hpse	assembly
Abcb8	assembly
Zfp316	assembly
Rhbdd2	assembly
4930449I24Rik	assembly
Zfp932	assembly
Vkorc1l1	assembly
Speer4a1	assembly
Mrpl1	assembly
Col26a1	assembly
Akap9	assembly
Lgi2	assembly
Zar1	assembly
Agap3	assembly
Rbm47	assembly
Sbno1	assembly
Eif2b1	assembly
Aimp2	assembly
Slc29a4	assembly
Stard13	assembly
Slc26a1	assembly
Tnip2	assembly
Ppat	assembly
Snx17	assembly
Afm	assembly
Plac8	assembly
Crygn	assembly
Cyp3a44	assembly
Atp10d	assembly
Pilra	assembly
Pilrb1	assembly
Kmt5a	assembly
Ran	assembly
G3bp2	assembly
Semp2l2a	assembly
Plb1	assembly
Cox18	assembly
Cdk8	assembly
P2rx2	assembly
Speer4d	assembly
Wasf3	assembly
Brat1	assembly
Gm3168	assembly
Tapt1	assembly
Duxf3	assembly
Tmem181a	assembly
Asic3	assembly
N4bp2	assembly
Barhl2	assembly
Tmem184a	assembly
Haus3	assembly
Tmem119	assembly
Tmem60	assembly
Lrrc66	assembly
Nat8l	assembly
Trappc14	assembly
Fam193a	assembly
N4bp2l2	assembly
Mblac1	assembly
BC051076	assembly
Arap2	assembly
Cpz	assembly
Dnah10	assembly
Kntc1	assembly
Polr2b	assembly
Rad9b	assembly
Sh3tc1	assembly
Slc5a6	assembly
Trim50	assembly
Vps37d	assembly
B3gnt4	assembly
Setd1b	assembly
Dnajc5g	assembly
Iqca1l	assembly
Lrrd1	assembly
Adamts3	assembly
9130230L23Rik	assembly
Taok3	assembly
Tmem150c	assembly
C130026L21Rik	assembly
Tmem132d	assembly
D430018E03Rik	assembly
Shisa3	assembly
Dhx37	assembly
E130018O15Rik	assembly
Katnal1	assembly
Got2-ps1	assembly
Papolb	assembly
Cycs-ps2	assembly
Cbfa2t2-ps1	assembly
2700079J08Rik	assembly
Pea15b-ps	assembly
Ugt2b35	assembly
Pigg	assembly
Grxcr1	assembly
D0Wsu3	ePCR

Notes

• Reference
  The markers listed below for this experiment were mapped to mouse chromosomes based on sequence similarities to the Mouse Genome Sequencing Consortium (MGSC V3) assembly. The chromosomal locations were downloaded from the Ensembl database. The relative band sizes and therefor cytogenetic positions within a chromosome are estimated from a drawing of the karyotype. The total bp length of the euchromatic chromosome sequence is divided up in
  proportion.