4930519G04Rik Gene Detail

Summary

• Symbol
  4930519G04Rik
• Name
  RIKEN cDNA 4930519G04 gene
• Synonyms
  1700014B12Rik

• Feature Type
  protein coding gene
• IDs
  MGI:1914843
  NCBI Gene: 67593
• Alliance
  genome feature page
• Transcription Start Sites
  7 TSS

Location &
Maps

• Sequence Map
  Chr5:114991725-115021941 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, 55.99 cM, cytoband F
• Mapping Data
  2 experiments

Strain
Comparison

• SNPs within 2kb
  883 from dbSNP Build 142
• Strain Annotations
  14

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1914843	protein coding gene	Chr5:114991707-115021941 (+)
129S1/SvImJ	ENSMUSG00200021360	protein coding gene	Chr5:108733302-108763499 (+)
A/J	ENSMUSG00195036240	protein coding gene	Chr5:108246110-108276316 (+)
AKR/J	ENSMUSG00220050318	protein coding gene	Chr5:107762644-107792844 (+)
BALB/cJ	ENSMUSG00180041956	protein coding gene	Chr5:108383973-108414177 (+)
C3H/HeJ	ENSMUSG00175046627	protein coding gene	Chr5:110372058-110402272 (+)
C57BL/6NJ	ENSMUSG00215011929	protein coding gene	Chr5:108392561-108422781 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0027606	protein coding gene	Chr5:107803048-107832207 (+)
CAST/EiJ	no annotation
CBA/J	ENSMUSG00210036040	protein coding gene	Chr5:109124097-109154306 (+)
DBA/2J	ENSMUSG00185044667	protein coding gene	Chr5:112175263-112207810 (+)
FVB/NJ	ENSMUSG00205022163	protein coding gene	Chr5:108022373-108052588 (+)
JF1/MsJ	no annotation
LP/J	ENSMUSG00230042374	protein coding gene	Chr5:116271465-116301664 (+)
NOD/ShiLtJ	ENSMUSG00190024375	protein coding gene	Chr5:108060499-108090713 (+)
NZO/HlLtJ	ENSMUSG00225013332	protein coding gene	Chr5:123924696-123957242 (+)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• MGI Vertebrate Homology
  4930519G04Rik stringent orthology
  1 mouse;1 rat
  
• Gene Tree
  4930519G04Rik
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  9 phenotype references
  

• All Mutations and Alleles
  5
• Chemically induced (other)
  1
• Gene trapped
  1
• Radiation induced
  1
• Targeted
  2
• Genomic Mutations
  2 involving 4930519G04Rik
• Incidental Mutations
  Mutagenetix , APF
• Find Mice (IMSR)
  14 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  597
• cDNA Data
  6

Tissue x Stage Matrix

• Other Mouse Links
  Allen Institute
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  49
• RefSeq
  16
• UniProt
  6
• CCDS
  CCDS19574.1

• Ensembl
  ENSMUSG00000029564 (Evidence)
• NCBI Gene
  67593

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000029564	Ensembl Gene Model | MGI Sequence Detail	30217	C57BL/6J
transcript	ENSMUST00000031547	Ensembl | MGI Sequence Detail	2092	Not Applicable
polypeptide	ENSMUSP00000031547	Ensembl | MGI Sequence Detail	205	Not Applicable

Protein
Information

• UniProt
  6 Sequences

Molecular
Reagents

• All nucleic 6

  cDNA 6

  
  

  Microarray probesets 4

Other
Accession IDs

MGI:1919459

References

• Summaries
  All 26

  Phenotypes 9
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

TSS for 4930519G04Rik:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr48104	Chr5:114991721-114991728 (+)	0 bp
Tssr48105	Chr5:114991769-114991782 (+)	51 bp
Tssr48106	Chr5:115003526-115003541 (+)	11,809 bp
Tssr48107	Chr5:115003570-115003579 (+)	11,850 bp
Tssr48108	Chr5:115020528-115020535 (+)	28,807 bp
Tssr48109	Chr5:115021412-115021421 (+)	29,692 bp
Tssr48110	Chr5:115021427-115021433 (+)	29,705 bp