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Cbfa2t2-ps1 Pseudogene Detail
Summary
  • Symbol
    Cbfa2t2-ps1
  • Name
    CBFA2/RUNX1 translocation partner 2, pseudogene 1
  • Synonyms
    Cbfa2t2h-ps1, yMTGR1
Location &
Maps
more
  • Sequence Map
    Chr5:60388826-60389555 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, 31.87 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    101 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1333788
 pseudogene Chr5:60388721-60389555 (+)
129S1/SvImJ ENSMUSG00200000190
 pseudogene Chr5:56002727-56003456 (+)
A/J ENSMUSG00195000478
 pseudogene Chr5:55350490-55350507 (+)
AKR/J ENSMUSG00220007143
 pseudogene Chr5:55439088-55439105 (+)
BALB/cJ ENSMUSG00180006595
 pseudogene Chr5:55112905-55112922 (+)
C3H/HeJ ENSMUSG00175001758
 pseudogene Chr5:57110707-57110724 (+)
C57BL/6NJ ENSMUSG00215002839
 pseudogene Chr5:55902507-55903236 (+)
CAROLI/EiJ no annotation
CAST/EiJ ENSTCUG00005000512
 pseudogene Chr5:55117905-55117922 (+)
CBA/J ENSMUSG00210000276
 pseudogene Chr5:56064910-56064927 (+)
DBA/2J ENSMUSG00185000202
 pseudogene Chr5:57938102-57938831 (+)
FVB/NJ no annotation
JF1/MsJ ENSUMUG00000024592
 pseudogene Chr5:62463722-62463739 (+)
LP/J ENSMUSG00230008861
 pseudogene Chr5:62616771-62617500 (+)
NOD/ShiLtJ ENSMUSG00190000614
 pseudogene Chr5:55038936-55038953 (+)
NZO/HlLtJ ENSMUSG00225002509
 pseudogene Chr5:67738701-67739430 (+)
NZO/HlLtJ ENSMUSG00225006055
 pseudogene Chr2:160971538-161054662 (+)
PWK/PhJ no annotation
SPRET/EiJ ENSMSPG00010004000
 pseudogene Chr5:56761319-56761336 (+)
WSB/EiJ ENSIUOG00005000138
 pseudogene Chr5:57998579-57998596 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
  • All Mutations and Alleles
    6
  • Chemically induced (other)
    2
  • Gene trapped
    3
  • Spontaneous
    1
  • Genomic Mutations
    3 involving Cbfa2t2-ps1
  • Find Mice (IMSR)
    0 strains or lines available
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
Sequences &
Gene Models
less
  • All Sequences
    22
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000087034 Ensembl Gene Model | MGI Sequence Detail 730 C57BL/6J ±  kb
transcript ENSMUST00000117165 Ensembl | MGI Sequence Detail 730 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 2
    Genomic 2
References
more
  • Summaries
    All 13
    Phenotypes 6
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/01/2026
MGI 6.24 		The Jackson Laboratory