2900005J15Rik MGI Mouse Gene Detail - MGI:1914511

Symbol

2900005J15Rik
Name

RIKEN cDNA 2900005J15 gene

Feature Type

lncRNA gene
IDs

MGI:1914511
NCBI Gene: 67261
Alliance

genome feature page
Transcription Start Sites

2 TSS

Sequence Map

Chr5:25305973-25308005 bp, + strand
From NCBI annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

Genetic Map

Chromosome 5, 12.22 cM, cytoband A3
Mapping Data

2 experiments

SNPs within 2kb

124 from dbSNP Build 142
Strain Annotations

31

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1914511	lncRNA gene	Chr5:25305084-25315117 (+)
129S1/SvImJ	ENSMUSG00200014950	lncRNA gene	Chr5:20917754-20926938 (+)
129S1/SvImJ	ENSMUSG00200013086	protein coding gene	Chr5:20917584-20919909 (+)
A/J	ENSMUSG00195044401	protein coding gene	Chr5:20385365-20387622 (+)
A/J	ENSMUSG00195049481	lncRNA gene	Chr5:20385535-20394807 (+)
AKR/J	ENSMUSG00220006991	protein coding gene	Chr5:20478822-20481118 (+)
AKR/J	ENSMUSG00220009377	lncRNA gene	Chr5:20479041-20488317 (+)
BALB/cJ	ENSMUSG00180020828	protein coding gene	Chr5:20251477-20253804 (+)
BALB/cJ	ENSMUSG00180026752	lncRNA gene	Chr5:20251647-20260824 (+)
C3H/HeJ	ENSMUSG00175049806	lncRNA gene	Chr5:22183699-22192973 (+)
C3H/HeJ	ENSMUSG00175046770	protein coding gene	Chr5:22183529-22185788 (+)
C57BL/6NJ	ENSMUSG00215041450	lncRNA gene	Chr5:20818993-20828174 (+)
C57BL/6NJ	ENSMUSG00215040453	protein coding gene	Chr5:20818823-20821148 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0013718	unclassified non-coding RNA gene	Chr5:20010035-20018961 (+)
CAST/EiJ	ENSTCUG00005003605	lncRNA gene	Chr5:20394228-20403472 (+)
CBA/J	ENSMUSG00210044937	protein coding gene	Chr5:21222818-21225077 (+)
CBA/J	ENSMUSG00210049519	lncRNA gene	Chr5:21222988-21232258 (+)
DBA/2J	ENSMUSG00185039516	lncRNA gene	Chr5:22755401-22764598 (+)
DBA/2J	ENSMUSG00185032800	protein coding gene	Chr5:22755231-22757566 (+)
FVB/NJ	ENSMUSG00205032291	lncRNA gene	Chr5:20022671-20031849 (+)
FVB/NJ	ENSMUSG00205031188	protein coding gene	Chr5:20022501-20024826 (+)
JF1/MsJ	ENSUMUG00000007663	lncRNA gene	Chr5:27318176-27327335 (+)
LP/J	ENSMUSG00230025782	lncRNA gene	Chr5:27199705-27208885 (+)
LP/J	ENSMUSG00230023697	protein coding gene	Chr5:27199535-27201860 (+)
NOD/ShiLtJ	ENSMUSG00190004913	protein coding gene	Chr5:20312279-20314614 (+)
NOD/ShiLtJ	ENSMUSG00190005065	lncRNA gene	Chr5:20312449-20321646 (+)
NZO/HlLtJ	ENSMUSG00225017118	protein coding gene	Chr5:32608672-32611007 (+)
NZO/HlLtJ	ENSMUSG00225020554	lncRNA gene	Chr5:32608842-32618030 (+)
PWK/PhJ	ENSLUMG00010048939	lncRNA gene	Chr5:20357240-20366414 (+)
SPRET/EiJ	ENSMSPG00010045304	lncRNA gene	Chr5:21216459-21226528 (+)
WSB/EiJ	ENSIUOG00005044965	lncRNA gene	Chr5:23121191-23130383 (+)

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Gene Tree

2900005J15Rik

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References

1 with disease annotations

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Phenotype Summary

11 phenotype references

All Mutations and Alleles

5
Chemically induced (other)

2
Radiation induced

2
Spontaneous

1
Genomic Mutations

5 involving 2900005J15Rik
Find Mice (IMSR)

1 strains or lines available

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Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.

Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

Assay Results

597
cDNA Data

7

Tissue x Stage Matrix

Other Mouse Links

Allen Institute

GEO

Expression Atlas

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All Sequences

52
RefSeq

1
UniProt

1

Ensembl

ENSMUSG00000043833 (Evidence)
NCBI Gene

67261

			Length	Strain/Species	Flank
genomic	67261	NCBI Gene Model \| MGI Sequence Detail	2033	C57BL/6J	± kb
transcript	NR_027851	RefSeq \| MGI Sequence Detail	2033	C57BL/6
polypeptide	Q9D5C5	UniProt \| EBI \| MGI Sequence Detail	118	Not Applicable

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UniProt

1 Sequence

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All nucleic 7

cDNA 7

Microarray probesets 1

Summaries

All 26

Diseases 1

Phenotypes 11
Earliest

J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
Latest

J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

TSS for 2900005J15Rik:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr45454	Chr5:25305698-25305757 (+)	-245 bp
Tssr45455	Chr5:25305921-25305986 (+)	-19 bp

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support.	last database update 09/01/2026 MGI 6.24