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Mapping Data
Experiment
  • Experiment
    TEXT-Physical Mapping
  • Chromosome
    12
  • Reference
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • ID
    MGI:2449329
Genes
GeneAlleleAssay TypeDescription
Erg28 assembly
Plekhd1os assembly
Sf3b6 assembly
Ccdc88c assembly
Serpina1f assembly
Ttc8 assembly
Isca2 assembly
Eif2s1 assembly
Colec11 assembly
Zc3h14 assembly
Tspan13 assembly
Sptssa assembly
1110002L01Rik assembly
1110006E14Rik assembly
Fcf1 assembly
1110008L16Rik assembly
Eml1 assembly
Zfyve21 assembly
Atad2b assembly
Atp5s assembly
Dcdc2c assembly
Arel1 assembly
Angel1 assembly
Nudt14 assembly
Dnaaf2 assembly
Ppp4r3a assembly
Nampt assembly
Atp6v1c2 assembly
Sox11 assembly
Aldh6a1 assembly
Acyp1 assembly
Cdhr3 assembly
Ldah assembly
Jkamp assembly
Clec14a assembly
Pnpla8 assembly
Exoc3l4 assembly
Serpina3k assembly
1300014J16Rik assembly
Nemf assembly
Med6 assembly
Hhipl1 assembly
Exoc3l4 assembly
Dlst assembly
1700001K19Rik assembly
1700086L19Rik assembly
Cox8c assembly
1700008C04Rik assembly
1700008O09Rik assembly
Dnal1 assembly
Prps1l1 assembly
Rab10os assembly
Allc assembly
Ttc32 assembly
1700013N06Rik assembly
Zc3h14 assembly
Ift43 assembly
1700019M22Rik assembly
1700020D12Rik assembly
Gpatch2l assembly
1700022F17Rik assembly
1700022H16Rik assembly
Kcnk10 assembly
Snhg10 assembly
Tex22 assembly
1700029J08Rik assembly
Ttc9 assembly
1700030I03Rik assembly
1700030L22Rik assembly
Churc1 assembly
1700031P21Rik assembly
1700034J04Rik assembly
4921516I12Rik assembly
1700040E09Rik assembly
Spanxn4 assembly
Ttll5 assembly
Moap1 assembly
1700052I22Rik assembly
Prox2 assembly
Hbp1 assembly
1700060O08Rik assembly
1700064M15Rik assembly
Apopt1 assembly
1700081N11Rik assembly
Mipol1 assembly
1700083H02Rik assembly
1700085C21Rik assembly
1700086L19Rik assembly
1700101O05Rik assembly
1700101O22Rik assembly
1700104L18Rik assembly
1700105G05Rik assembly
Lrrc72 assembly
1700113P08Rik assembly
1700121N20Rik assembly
1700123J03Rik assembly
1700127F24Rik assembly
Moap1 assembly
1810007C17Rik assembly
Eapp assembly
Ptgr2 assembly
Cox16 assembly
Ifi27l2b assembly
Slirp assembly
Rab10os assembly
Cinp assembly
Pcnx4 assembly
Cox16 assembly
1810056I18Rik assembly
Slc7a15 assembly
Slc39a9 assembly
2010015B12Rik assembly
Otub2 assembly
2010107E04Rik assembly
Ccdc71l assembly
Degs2 assembly
Sntg2 assembly
2210039B01Rik assembly
2310002D06Rik assembly
Ppm1a assembly
Ralgapa1 assembly
Ttll5 assembly
Rab15 assembly
Serpina9 assembly
2310015A10Rik assembly
2310016D03Rik assembly
Dhrs7 assembly
Rnf113a2 assembly
Daam1 assembly
Wdr20 assembly
Cipc assembly
2310047L11Rik assembly
2310058N22Rik assembly
2310061D13Rik assembly
2310068G24Rik assembly
Dus4l assembly
Pxdn assembly
2410004P03Rik assembly
Lrr1 assembly
Tmem121 assembly
Riox1 assembly
Zfp277 assembly
Ptrhd1 assembly
Cdca4 assembly
Atg2b assembly
Rpl36al assembly
Fam49a assembly
Nubpl assembly
Ankrd9 assembly
Moap1 assembly
Wdr89 assembly
Smoc1 assembly
Rbm25 assembly
2610001N11Rik assembly
Adck1 assembly
Rbm25 assembly
Frmd6 assembly
Efcab11 assembly
Trmt5 assembly
Ppp2r5c assembly
Setd3 assembly
Efcab11 assembly
Inf2 assembly
Trip11 assembly
Slc39a9 assembly
3300002A11Rik assembly
Snapc1 assembly
2700049A03Rik assembly
Ppp2r5c assembly
Zc3h14 assembly
2700073G19Rik assembly
Dus4l assembly
2700097O09Rik assembly
Zc2hc1c assembly
Apopt1 assembly
Eif5 assembly
Timm9 assembly
Tunar assembly
Twistnb assembly
2810029C07Rik assembly
2810032G03Rik assembly
Mboat2 assembly
L3hypdh assembly
Atxn7l1 assembly
Snx6 assembly
Cenpo assembly
Klhl28 assembly
Cinp assembly
Zfp839 assembly
Zbtb25 assembly
Mirg assembly
Tdp1 assembly
Smc6 assembly
2900003A17Rik assembly
Bbof1 assembly
2900009J20Rik assembly
Meg3 assembly
2900016J10Rik assembly
2900021C02Rik assembly
Pcnx assembly
Pfn4 assembly
2900045O20Rik assembly
Myt1l assembly
Foxg1 assembly
Zbtb25 assembly
Gpr22 assembly
Glrx5 assembly
2900082C11Rik assembly
2900086B20Rik assembly
Myt1l assembly
Kcnk10 assembly
Rps6ka5 assembly
3110009F21Rik assembly
3110018I06Rik assembly
Scfd1 assembly
Actn1 assembly
Rdh14 assembly
Trip11 assembly
Kidins220 assembly
3110039M20Rik assembly
Meg3 assembly
3110056K07Rik assembly
Nin assembly
3200001D21Rik assembly
3300002A11Rik assembly
Akap5 assembly
3732407C23Rik assembly
Smc6 assembly
Klhl28 assembly
Xrcc3 assembly
Acot6 assembly
Dlst assembly
Serpina12 assembly
Ppp2r5e assembly
4633402D09Rik assembly
4732465E10Rik assembly
4732487G21Rik assembly
Syne3 assembly
Itgb8 assembly
4833405L11Rik assembly
Slc39a9 assembly
4833432E10Rik assembly
4921501I09Rik assembly
4930447C04Rik assembly
Ttc6 assembly
4921507G05Rik assembly
4921508M14Rik assembly
Fam71d assembly
Tdp1 assembly
4921511I17Rik assembly
4921516I12Rik assembly
4921518K17Rik assembly
Lrrc9 assembly
3110056K07Rik assembly
Ralgapa1 assembly
Ccdc175 assembly
4930404H11Rik assembly
4930404K06Rik assembly
4930408O17Rik assembly
Fam228a assembly
Wdr20 assembly
4930423C22Rik assembly
4930423D22Rik assembly
Npas3 assembly
Ptprn2 assembly
4930425K24Rik assembly
4930426I24Rik assembly
4933406K04Rik assembly
Wdr20rt assembly
4930428E07Rik assembly
4930431C11Rik assembly
4930465M20Rik assembly
Lrrc9 assembly
4933409F18Rik assembly
4930440F04Rik assembly
Tdrd9 assembly
Rtn1 assembly
4930442G10Rik assembly
4930447C04Rik assembly
4930448C13Rik assembly
4930458K08Rik assembly
Wdr35 assembly
Kif4-ps assembly
4930465M20Rik assembly
4930512B01Rik assembly
4930473H19Rik assembly
4930474N09Rik assembly
4930477G07Rik assembly
4930478K11Rik assembly
4930480M12Rik assembly
4933406K04Rik assembly
Frmd6 assembly
Ak7 assembly
Efcab10 assembly
4930511A02Rik assembly
4930511J24Rik assembly
4930512B01Rik assembly
Fam71d assembly
4930519A11Rik assembly
Adam6b assembly
Dlst assembly
Cep128 assembly
Exd2 assembly
4930544I03Rik assembly
4930546B01Rik assembly
4930549C15Rik assembly
Tomm20l assembly
Arl4aos assembly
Asxl2 assembly
4930556H04Rik assembly
Ttll5 assembly
Atxn7l1os2 assembly
4930559C10Rik assembly
4930564B12Rik assembly
Dtd2 assembly
Ispd assembly
Otub2 assembly
4930595D18Rik assembly
Klhl28 assembly
4931403G20Rik assembly
Tex21 assembly
Sipa1l1 assembly
Catsperb assembly
4932429P19Rik assembly
4932441P12Rik assembly
4932703K07Rik assembly
Nrxn3 assembly
Ston2 assembly
4933406B15Rik assembly
4933406C10Rik assembly
Tc2n assembly
4933406K04Rik assembly
4933409F18Rik assembly
4933415E08Rik assembly
Lrrc72 assembly
4933422E07Rik assembly
4933424L07Rik assembly
Nbas assembly
Aldoart2 assembly
Susd6 assembly
4933406K04Rik assembly
Gskip assembly
4933435C09Rik assembly
4933436F18Rik assembly
Noxred1 assembly
5033406O09Rik assembly
5033421B08Rik assembly
5033424D13Rik assembly
5033425G24Rik assembly
5330409N07Rik assembly
2310015A10Rik assembly
5430401H09Rik assembly
Cep128 assembly
5430427M07Rik assembly
Pnma1 assembly
Galnt16 assembly
5730406E14Rik assembly
5730409N16Rik assembly
Ubr7 assembly
5730420F10Rik assembly
Sp4 assembly
Fbxo33 assembly
Pum2 assembly
Btbd7 assembly
5730510P18Rik assembly
5730526G10Rik assembly
Gphn assembly
Dhrs7 assembly
Greb1 assembly
Isca2 assembly
5830400J07Rik assembly
5830406C21Rik assembly
Ncapg2 assembly
5830428M24Rik assembly
Gen1 assembly
Trappc6b assembly
G2e3 assembly
Sf3b6 assembly
Mipol1 assembly
6030440G07Rik assembly
Trip11 assembly
6030490B17Rik assembly
Sox11 assembly
Rps6ka5 assembly
Ubxn2a assembly
Meg3 assembly
Dock4 assembly
Jakmip3 assembly
Tmem229b assembly
6330522J23Rik assembly
Gtf2a1 assembly
6430411K18Rik assembly
Irf2bpl assembly
Tmed8 assembly
6430597G12Rik assembly
6530401F13Rik assembly
Dtd2 assembly
6530402L11Rik assembly
6530406A20Rik assembly
Pacs2 assembly
Nrde2 assembly
6720456H09Rik assembly
Trmt61a assembly
4930426I24Rik assembly
Mdga2 assembly
Syne2 assembly
7030407O06Rik assembly
7420701I03Rik assembly
8030450B20Rik assembly
8030462D06Rik assembly
Ppp4r4 assembly
Cenpo assembly
Fam110c assembly
Dglucy assembly
Tmem30b assembly
Slc26a3 assembly
9130015A21Rik assembly
Moap1 assembly
5033406O09Rik assembly
9130222H03Rik assembly
Bcl11b assembly
Abcb5 assembly
9230109C02Rik assembly
9230116L04Rik assembly
Nrxn3 assembly
9330161L09Rik assembly
9330175H22Rik assembly
9330182L19Rik assembly
Tmem63c assembly
Zfyve26 assembly
Mdga2 assembly
2010107E04Rik assembly
D130020L05Rik assembly
Dcaf5 assembly
9430024F10Rik assembly
Elmsan1 assembly
9430031K09Rik assembly
9430078K24Rik assembly
Nova1 assembly
9530018F02Rik assembly
9530020I12Rik assembly
9530022J15Rik assembly
9530050K03Rik assembly
9630002D21Rik assembly
Ptgr2 assembly
9630050P21Rik assembly
Fam161b assembly
Dync1h1 assembly
Slc25a21 assembly
9930038B18Rik assembly
A130014H13Rik assembly
A230087F16Rik assembly
A230092J17Rik assembly
Taf1b assembly
Mark3 assembly
A430103D13Rik assembly
A530016L24Rik assembly
Agmo assembly
Arid4a assembly
Hectd1 assembly
A730018C14Rik assembly
A730046G19Rik assembly
A730073F16Rik assembly
Pomt2 assembly
Rps6kl1 assembly
Fam228b assembly
Slc24a4 assembly
Galc assembly
Ylpm1 assembly
A930023M06Rik assembly
A930027M08Rik assembly
Eml1 assembly
Rdh12 assembly
A930035E12Rik assembly
4930447C04Rik assembly
A930036A04Rik assembly
A930040O22Rik assembly
Tedc1 assembly
Gtf2a1 assembly
Acp1 assembly
Actr10 assembly
Adam4 assembly
Agr2 assembly
Rbm25 assembly
Sfta3-ps assembly
Lrfn5 assembly
Clmn assembly
Aspg assembly
Tecpr2 assembly
Vash1 assembly
Ap4b1 assembly
Ap4s1 assembly
Arf6 assembly
Arg2 assembly
Rhob assembly
Rhoj assembly
Mlh3 assembly
Plekhh1 assembly
Dnal1 assembly
Rock2 assembly
B230119K15Rik assembly
Prima1 assembly
B230217J21Rik assembly
Spata7 assembly
B230327D02Rik assembly
B230375D24Rik assembly
Acot4 assembly
Bcl11b assembly
B830012L14Rik assembly
Ptgr2 assembly
Dtd2 assembly
B930059L03Rik assembly
Bag5 assembly
Batf assembly
Baz1a assembly
Mlh3 assembly
Brf1 assembly
Bzw2 assembly
Slc25a29 assembly
Atg2b assembly
C030009J22Rik assembly
C030014C12Rik assembly
Efr3b assembly
Nrcam assembly
C030018P15Rik assembly
C030045M22Rik assembly
Trim9 assembly
BC022687 assembly
Nek9 assembly
Eml5 assembly
Nrcam assembly
C230007H23Rik assembly
C230081H03Rik assembly
Kidins220 assembly
Hbp1 assembly
Dnajc27 assembly
Zbtb1 assembly
C630016I17Rik assembly
Atg2b assembly
Myt1l assembly
Fancm assembly
Lamb1 assembly
E030047P09Rik assembly
Cdkl1 assembly
Cfl2 assembly
Foxn3 assembly
Coq6 assembly
Cpsf2 assembly
Crip2 assembly
Rapgef5 assembly
D130067P18Rik assembly
Twistnb assembly
Cog5 assembly
Tmem251 assembly
D230049E03Rik assembly
D430019H16Rik assembly
D430020J02Rik assembly
Wdr60 assembly
Zfp36l1 assembly
Atad2b assembly
D630012G11Rik assembly
Ttll5 assembly
Fam177a assembly
D730047E02Rik assembly
D730048A03Rik assembly
D830016K09Rik assembly
Trappc12 assembly
G2e3 assembly
Heatr5a assembly
Sp8 assembly
Daam1 assembly
Dact1 assembly
Ddx24 assembly
Dgkb assembly
Dio2 assembly
Dnajb9 assembly
Dnmt3a assembly
Dpf3 assembly
Pqlc3 assembly
Papln assembly
E130002L11Rik assembly
Mnat1 assembly
Btbd7 assembly
Srp54c assembly
E330035G20Rik assembly
Mthfd1 assembly
E530011G23Rik assembly
Egln3 assembly
Erh assembly
F730043M19Rik assembly
Fbln5 assembly
Fkbp1b assembly
Fkbp3 assembly
Fut8 assembly
Gpr132 assembly
Ppp2r3c assembly
Vash1 assembly
Golga5 assembly
Gpr68 assembly
Gstz1 assembly
Hpcal1 assembly
Hs1bp3 assembly
Immp2l assembly
Laptm4a assembly
Ltbp2 assembly
Map4k5 assembly
Mark3 assembly
Mbip assembly
Atxn3 assembly
Mnat1 assembly
Moap1 assembly
Mpp5 assembly
Ncoa1 assembly
Nfkbia assembly
Npc2 assembly
Nt5c1b assembly
Numb assembly
Erg28 assembly
Pdia6 assembly
Papola assembly
Pcnx assembly
Pik3cg assembly
Plek2 assembly
Pole2 assembly
Ppm1a assembly
Ppp2r5c assembly
Ppp2r5e assembly
Prkar2b assembly
Prkch assembly
Psma6 assembly
Ptpn21 assembly
Rad51b assembly
Rian assembly
Rnaseh1 assembly
Rock2 assembly
Rpl36 assembly
Rtn1 assembly
Sav1 assembly
Nemf assembly
Sel1l assembly
Serpina3a assembly
Serpina3g assembly
Serpina5 assembly
Srsf5 assembly
Sgpp1 assembly
Itsn2 assembly
Gemin2 assembly
Siva1 assembly
Six6 assembly
Snw1 assembly
Sostdc1 assembly
Atl1 assembly
Serpina1e assembly
Sptlc2 assembly
Srp54a assembly
Strn3 assembly
Synj2bp assembly
Taf1b assembly
Tex21 assembly
Timm9 assembly
Trim9 assembly
Tuba1c assembly
Ralgapa1 assembly
Tmx1 assembly
Rnf144a assembly
Rsad2 assembly
Vrk1 assembly
Vsnl1 assembly
Wars assembly
Wdr20rt assembly
Zfp36l1 assembly
Zfp386 assembly
Osr1 assembly
Dtnb assembly
Matn3 assembly
Rab10 assembly
Kcns3 assembly
Mycn assembly
Pomc assembly
Ntsr2 assembly
Cmpk2 assembly
Id2 assembly
Rrm2 assembly
Cys1 assembly
Lpin1 assembly
Eipr1 assembly
Slc26a3 assembly
Myt1l assembly
Sypl assembly
Dld assembly
Bcap29 assembly
Ahr assembly
Etv1 assembly
Lamb1 assembly
Meox2 assembly
Ifrd1 assembly
Coch assembly
Brms1l assembly
Pnn assembly
Sstr1 assembly
Arl4a assembly
Adam21 assembly
Fntb assembly
Pigh assembly
Klhdc2 assembly
Hif1a assembly
Six1 assembly
Max assembly
Rdh11 assembly
Acot1 assembly
Esr2 assembly
Atp6v1d assembly
Rgs6 assembly
Tshr assembly
Abcd4 assembly
Entpd5 assembly
Pgf assembly
Esrrb assembly
Psmc1 assembly
Galc assembly
Hsp90aa1 assembly
Asb2 assembly
Ifi27 assembly
Dicer1 assembly
Serpina3k assembly
Setd3 assembly
Yy1 assembly
Dlk1 assembly
Meg3 assembly
Ckb assembly
Amn assembly
Rcor1 assembly
Klc1 assembly
Crip1 assembly
Ighg2a assembly
Ighm assembly
Igh-VJ558 assembly
Igh-VX24 assembly
Esyt2 assembly
Vipr2 assembly
Ptprn2 assembly
1700047I17Rik2 assembly
4930421J07Rik assembly
Notes
  • Reference
    The markers listed below for this experiment were mapped to mouse chromosomes based on sequence similarities to the Mouse Genome Sequencing Consortium (MGSC V3) assembly. Chromosomal locations were obtained from the Genome Exploration Research Group of the RIKEN Institute of Physical and Chemical Research in Japan. Where multiple RIKEN clones were associated to the same marker by sequence similarity clustering, mapping data were loaded only if all RIKEN clones from the same cluster mapped to the same mouse chromosome.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
12/05/2017
MGI 6.11
The Jackson Laboratory