2810032G03Rik Gene Detail

Summary

• Symbol
  2810032G03Rik
• Name
  RIKEN cDNA 2810032G03 gene

• Feature Type
  lncRNA gene
• IDs
  MGI:1919919
  NCBI Gene: 72669
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:5425720-5466132 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, 2.60 cM
• Mapping Data
  2 experiments

Strain
Comparison

• SNPs within 2kb
  967 from dbSNP Build 142
• Strain Annotations
  31

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1919919	lncRNA gene	Chr12:5425139-5466640 (+)
129S1/SvImJ	ENSMUSG00200022535	protein coding gene	Chr12:2392375-2433500 (+)
129S1/SvImJ	ENSMUSG00200024065	lncRNA gene	Chr12:2392392-2433267 (+)
A/J	ENSMUSG00195015132	protein coding gene	Chr12:2419905-2461205 (+)
A/J	ENSMUSG00195016338	lncRNA gene	Chr12:2419922-2460972 (+)
AKR/J	ENSMUSG00220027982	protein coding gene	Chr12:2417710-2458831 (+)
AKR/J	ENSMUSG00220031552	lncRNA gene	Chr12:2417727-2458598 (+)
BALB/cJ	ENSMUSG00180015647	lncRNA gene	Chr12:2416377-2457423 (+)
BALB/cJ	ENSMUSG00180014742	protein coding gene	Chr12:2416360-2457656 (+)
C3H/HeJ	ENSMUSG00175009668	lncRNA gene	Chr12:2395527-2436546 (+)
C3H/HeJ	ENSMUSG00175009536	protein coding gene	Chr12:2395510-2436779 (+)
C57BL/6NJ	ENSMUSG00215026164	lncRNA gene	Chr12:2347204-2388068 (+)
C57BL/6NJ	ENSMUSG00215018940	protein coding gene	Chr12:2347187-2388301 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0004845	lincRNA gene	Chr12:2238148-2279961 (+)
CAST/EiJ	ENSTCUG00005023800	lncRNA gene	Chr12:2216267-2257489 (+)
CBA/J	ENSMUSG00210013683	lncRNA gene	Chr12:2415242-2456261 (+)
CBA/J	ENSMUSG00210013226	protein coding gene	Chr12:2415225-2456494 (+)
DBA/2J	ENSMUSG00185021445	lncRNA gene	Chr12:2399342-2440215 (+)
DBA/2J	ENSMUSG00185020864	protein coding gene	Chr12:2399325-2440448 (+)
FVB/NJ	ENSMUSG00205003037	protein coding gene	Chr12:2199559-2240667 (+)
FVB/NJ	ENSMUSG00205003492	lncRNA gene	Chr12:2199576-2240434 (+)
JF1/MsJ	ENSUMUG00000041985	lncRNA gene	Chr12:2388043-2429223 (+)
LP/J	ENSMUSG00230012157	lncRNA gene	Chr12:4227398-4268253 (+)
LP/J	ENSMUSG00230011380	protein coding gene	Chr12:4227381-4268486 (+)
NOD/ShiLtJ	ENSMUSG00190008502	lncRNA gene	Chr12:3641613-3682478 (+)
NOD/ShiLtJ	ENSMUSG00190007891	protein coding gene	Chr12:3641596-3682711 (+)
NZO/HlLtJ	ENSMUSG00225017939	protein coding gene	Chr12:6287467-6328575 (+)
NZO/HlLtJ	ENSMUSG00225019323	lncRNA gene	Chr12:6287484-6328342 (+)
PWK/PhJ	ENSLUMG00010017274	lncRNA gene	Chr12:2220857-2261843 (+)
SPRET/EiJ	ENSMSPG00010005135	lncRNA gene	Chr12:2650451-2690708 (+)
WSB/EiJ	ENSIUOG00005002440	lncRNA gene	Chr12:2399053-2439975 (+)

Homology

• Gene Tree
  2810032G03Rik
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Gene trapped
  1
• Find Mice (IMSR)
  1 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  9

Tissue x Stage Matrix

• Other Mouse Links
  Allen Institute
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  56
• RefSeq
  1
• UniProt
  3

• Ensembl
  ENSMUSG00000037735 (Evidence)
• NCBI Gene
  72669

Representative Sequences			Length	Strain/Species
genomic	72669	NCBI Gene Model | MGI Sequence Detail	40413	C57BL/6J
transcript	NR_015579	RefSeq | MGI Sequence Detail	2040	C57BL/6
polypeptide	Q8CDR9	UniProt | EBI | MGI Sequence Detail	130	Not Applicable

Protein
Information

• UniProt
  3 Sequences

Molecular
Reagents

• All nucleic 11

  Genomic 2

  cDNA 9

  
  

  Microarray probesets 3

Other
Accession IDs

MGI:2144833

References

• Summaries
  All 19

  Phenotypes 2
• Earliest
  J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
• Latest
  J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582