Mapping Data

Experiment

• Experiment
  TEXT-Physical Mapping
• Chromosome
  19
• Reference
  J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
• ID
  MGI:2449336

Genes

Gene	Assay Type
Acy3	assembly
Tmem223	assembly
Nudt22	assembly
Keg1	assembly
Pcgf5	assembly
Stn1	assembly
Hoga1	assembly
Cpn1	assembly
Efemp2	assembly
Tmem179b	assembly
Sdhaf2	assembly
Rfk	assembly
Acta2	assembly
Fads1	assembly
Ankrd13d	assembly
Fbxl15	assembly
Ahnak	assembly
Gnaq	assembly
Tmem109	assembly
Psd	assembly
Rab1b	assembly
Vti1a	assembly
Vps51	assembly
Osbp	assembly
Rbm20	assembly
Vti1a	assembly
Pdcd11	assembly
Hnrnpul2	assembly
Slc18a2	assembly
Pcgf5	assembly
Ints5	assembly
1110059E24Rik	assembly
Lrrn4cl	assembly
Pum3	assembly
Nhlrc2	assembly
Frmd8	assembly
Mus81	assembly
Cep55	assembly
D530017H19Rik	assembly
Rab3il1	assembly
Mamdc2	assembly
Dock8	assembly
Vwce	assembly
1500002I01Rik	assembly
Tmem179b	assembly
1500015L24Rik	assembly
Zdhhc16	overlapping clones, direct sequencing
Hectd2os	assembly
Rnaseh2c	assembly
Snx15	assembly
Snx15	assembly
1500032F14Rik	assembly
B4gat1	assembly
1700001K23Rik	assembly
Aldh3b1	assembly
1700008F19Rik	assembly
1700010L13Rik	assembly
Ccdc172	assembly
1700016H03Rik	assembly
Ms4a20	assembly
Ak3	assembly
Catsperz	assembly
Spmip5	assembly
Nscme3l	assembly
Gsto2	assembly
1700021N20Rik	assembly
1700021P04Rik	assembly
1700022C07Rik	assembly
1700023D09Rik	assembly
Ms4a19	assembly
Cfap95	assembly
1700039E22Rik	assembly
1700048J15Rik	assembly
1700048O14Rik	assembly
1700054A03Rik	assembly
Plaat5	assembly
Aldh3b3	assembly
Ms4a13	assembly
1700061A03Rik	assembly
Hspa12a	assembly
Gbf1	assembly
Ptar1	assembly
1700084K02Rik	assembly
Plaat5	assembly
Tex54	assembly
Stambpl1	assembly
1700105P06Rik	assembly
1700106J12Rik	assembly
Tmem138	assembly
1700122C19Rik	assembly
Majin	assembly
E030003E18Rik	assembly
Tmem258	assembly
Pnlip	assembly
1810007D17Rik	assembly
1810009A15Rik	assembly
Entpd7	assembly
Atg2a	assembly
Tsga10ip	assembly
Marchf5	assembly
1810018F18Rik	assembly
Papss2	assembly
Entpd7	assembly
Ccdc186	assembly
1810018F18Rik	assembly
1810035K13Rik	assembly
Pik3ap1	assembly
1810018F18Rik	assembly
Dennd10	assembly
1810055G02Rik	assembly
1810058N15Rik	assembly
Tmem179b	assembly
Tbc1d10c	assembly
1810073G21Rik	assembly
Tm9sf3	assembly
Nt5c2	assembly
Ifit1bl2	assembly
Rbm20	assembly
Eif1ad	assembly
2010003K11Rik	assembly
Borcs7	assembly
Ptar1	assembly
2010100M03Rik	assembly
2010105D22Rik	assembly
Cyp2c66	assembly
Cyp2c55	assembly
Cyp2c65	assembly
Dpf2	assembly
Zfyve27	assembly
Ttc9c	assembly
Malat1	assembly
Slc25a28	assembly
2210404E10Rik	assembly
Ablim1	assembly
Ms4a6c	assembly
Lipn	assembly
Bbip1	assembly
Cyb561a3	assembly
Marchf5	assembly
Avpi1	assembly
Sh3pxd2a	assembly
2310034G01Rik	assembly
Frmd8	assembly
2310035P21Rik	assembly
Mrpl16	assembly
Nudt8	assembly
Cutc	assembly
Neat1	assembly
Hif1an	assembly
Ahnak	assembly
Lipf	assembly
Myof	assembly
Klf9	assembly
Zfand5	assembly
Stn1	assembly
Uhrf2	assembly
Sorbs1	assembly
Fam204a	assembly
2310066F23Rik	assembly
Tmem134	assembly
Dnmbp	assembly
Dnmbp	assembly
Sac3d1	assembly
Asrgl1	assembly
Smndc1	assembly
Pold4	assembly
Cabp4	assembly
Gucy2g	assembly
2410080I02Rik	assembly
Bloc1s2	assembly
2410152P15Rik	assembly
Bbip1	assembly
Trub1	assembly
Fam204a	assembly
2610016A17Rik	assembly
Map3k11	assembly
5730408K05Rik	assembly
Exosc1	assembly
Cdca5	assembly
Ccdc88b	assembly
Exosc1	assembly
Smarca2	assembly
Ablim1	assembly
Fgfbp3	assembly
Sf3b2	assembly
Exosc1	assembly
2610016A17Rik	assembly
Cwf19l1	assembly
Cep55	assembly
Tut1	assembly
Sgms1os1	assembly
Marchf5	assembly
Incenp	assembly
Cacul1	assembly
Zfta	assembly
2700089I24Rik	assembly
Entpd7	assembly
Tm9sf3	assembly
Calhm2	assembly
Zfp518a	assembly
2810404I24Rik	assembly
Cacul1	assembly
Erlin1	assembly
Sf3b2	assembly
Tmem216	assembly
2810449D17Rik	assembly
Crtac1	assembly
2810455D13Rik	assembly
2900002J02Rik	assembly
Pabir1	assembly
Ndufb8	assembly
2900017F05Rik	assembly
Cox15	assembly
2900042A17Rik	assembly
Tmem138	assembly
Cuedc2	assembly
Lcor	assembly
Tm7sf2	assembly
Vps51	assembly
Pyroxd2	assembly
4122401K19Rik	assembly
Spata6l	assembly
Cfap43	assembly
Fam111a	assembly
Lipm	assembly
Atl3	assembly
Cpeb3	assembly
Ablim1	assembly
4833407H14Rik	assembly
4833408A19Rik	assembly
Pyroxd2	assembly
Glis3	assembly
4833417J20Rik	assembly
4833424O12Rik	assembly
Rbm4b	assembly
Atad1	assembly
Plaat5	assembly
Vti1a	assembly
4930414N06Rik	assembly
Pip5k1bos	assembly
Gsto2	assembly
Cfap43	assembly
Ptar1	assembly
4930433M22Rik	assembly
4930442E04Rik	assembly
4930447K04Rik	assembly
Mfsd13a	assembly
4930449E18Rik	assembly
Cfap43	assembly
4930470F04Rik	assembly
Rab11fip2	assembly
4930481A15Rik	assembly
4930484I04Rik	assembly
4930504B16Rik	assembly
4930505N22Rik	assembly
Shtn1	assembly
Vps13a	assembly
Tctn3	assembly
4930524O05Rik	assembly
4930526L06Rik	assembly
Ppp6r3	assembly
Dpp3	assembly
4930535F04Rik	assembly
Mfsd13a	assembly
Vps13a	assembly
4930552P12Rik	assembly
4930554I06Rik	assembly
4930557B21Rik	assembly
Bbip1	assembly
Zbtb3	assembly
Saxo4	assembly
4931403E22Rik	assembly
4931408D14Rik	assembly
Trpd52l3	assembly
Frmd8	assembly
Naa40	assembly
Plpp6	assembly
Pcgf6	assembly
Arhgap19	assembly
4933411K16Rik	assembly
4933412A08Rik	assembly
4933413C19Rik	assembly
Tmc1	assembly
Golga7b	assembly
1700122C19Rik	assembly
4933429K18Rik	assembly
Batf2	assembly
4933436E20Rik	assembly
Smndc1	assembly
Plgrkt	assembly
5033423O07Rik	assembly
Ms4a18	assembly
Yif1a	assembly
Dpcd	assembly
Hps6	assembly
Tnks2	assembly
4833407H14Rik	assembly
5430440L12Rik	assembly
Kdm2a	assembly
5730408K05Rik	assembly
5730409K12Rik	assembly
5730409N24Rik	assembly
Tle4	assembly
Abhd17b	assembly
Cpsf7	assembly
Fra10ac1	assembly
Zdhhc24	assembly
Marchf5	assembly
Atl3	assembly
Cep78	assembly
Pcgf5	assembly
4833407H14Rik	assembly
Zfp950	assembly
Pcgf5	assembly
Dock8	assembly
Zfand5	assembly
Zdhhc6	assembly
Hps1	assembly
Peli3	assembly
Slf2	assembly
6030458E02Rik	assembly
Gnaq	assembly
Sorcs3	assembly
Prune2	assembly
Zfp518a	assembly
Taf5	assembly
Sfr1	assembly
Apba1	assembly
Eno4	assembly
Nrxn2	assembly
2810449D17Rik	assembly
6720468P15Rik	assembly
Ccdc86	assembly
6820402O18Rik	assembly
Klc2	assembly
8030456M14Rik	assembly
Stambpl1	assembly
8430434A19Rik	assembly
E030024N20Rik	assembly
Trub1	assembly
9030425L15Rik	assembly
9030607L02Rik	assembly
9130009M17Rik	assembly
Armh3	assembly
9130016M20Rik	assembly
Il33	assembly
9330185G11Rik	assembly
Ablim1	assembly
9430020M11Rik	assembly
9430030N17Rik	assembly
Malat1	assembly
Sorbs1	assembly
Pcgf5	assembly
9530025L08Rik	assembly
Pgm5	assembly
9530039L23Rik	assembly
Sgms1	assembly
Zfyve27	assembly
9630005C17Rik	assembly
Cacul1	assembly
E330013P04Rik	assembly
Brd10	assembly
Plekhs1	assembly
A130015J22Rik	assembly
Dock8	assembly
Prune2	assembly
A330032B11Rik	assembly
Prune2	assembly
Ms4a7	assembly
Catsperz	assembly
A530045L16Rik	assembly
Zfp91	assembly
Lpxn	assembly
Ccdc186	assembly
Lcor	assembly
Hectd2	assembly
Eif3a	assembly
Hif1an	assembly
A830039H05Rik	assembly
Rab11fip2	assembly
A830080L01Rik	assembly
A930001C03Rik	assembly
Fads1	assembly
A930007I19Rik	assembly
Tmem216	assembly
A930026I22Rik	assembly
A930028N01Rik	assembly
Kank1	assembly
Mlana	assembly
Wdr74	assembly
Nmrk1	assembly
A1cf	assembly
Acta2	assembly
Actr1a	assembly
Glyat	assembly
Btaf1	assembly
Pten	assembly
Macrod1	assembly
4833438C02Rik	assembly
Aldh3b2	assembly
Ak3	assembly
Rhod	assembly
Arl2	assembly
Asah2	assembly
1110034N17Rik	assembly
Afap1l2	assembly
Vps37c	assembly
Lpxn	assembly
Kank1	assembly
Exoc6	assembly
C030016D13Rik	assembly
E330013P04Rik	assembly
Flrt1	assembly
B130024M06Rik	assembly
B130065D12Rik	assembly
B230104F01Rik	assembly
Syt7	assembly
B230214N19Rik	assembly
B230217O12Rik	assembly
B230378D16Rik	assembly
Sf3b2	assembly
B3gat3	assembly
Pten	assembly
Trpm3	assembly
Snx32	assembly
B930096F20Rik	assembly
Bad	assembly
Banf1	assembly
Brms1	assembly
Ric1	assembly
C130013I19Rik	assembly
Rfx3	assembly
C330002G04Rik	assembly
Kif20b	assembly
C330026H20Rik	assembly
C430005N20Rik	assembly
Anxa1	assembly
Taf6l	assembly
Kmt5b	assembly
C730002L08Rik	assembly
Fermt3	assembly
Sfxn2	assembly
Cabp2	assembly
Cdc37l1	assembly
Chrm1	assembly
Slc15a3	assembly
Cox8a	assembly
Ankrd1	assembly
Smc3	assembly
Cstf2t	assembly
Ctsf	assembly
Ctsw	assembly
Cyp2c37	assembly
As3mt	assembly
Gldc	assembly
Cacul1	assembly
Slc1a1	assembly
Uhrf2	assembly
Cdk2ap2	assembly
Bbs1	assembly
Ppp6r3	assembly
Ubxn1	assembly
Xpnpep1	assembly
Vps13a	assembly
Slc35g1	assembly
D430030G11Rik	assembly
D430033H22Rik	assembly
Ccnj	assembly
D530017H19Rik	assembly
Slc22a19	assembly
Doc2g	assembly
D830016O14Rik	assembly
D930032P07Rik	assembly
D930033H10Rik	assembly
Dclre1a	assembly
Dnajc4	assembly
Drap1	assembly
E030003E18Rik	assembly
E030024N20Rik	assembly
Myof	assembly
E130107B13Rik	assembly
Hells	assembly
Marchf5	assembly
E230008J23Rik	assembly
Glis3	assembly
E330018D03Rik	assembly
E430016L07Rik	assembly
Eif3a	assembly
Pdcd1lg2	assembly
Acsl5	assembly
Fads2	assembly
Fads3	assembly
Fen1	assembly
Fibp	assembly
Sh3pxd2a	assembly
Ganab	assembly
Gfra1	assembly
Cblif	assembly
Ptgdr2	assembly
Gsto1	assembly
Hells	assembly
Ifit1	assembly
Ifit2	assembly
Insl6	assembly
Kcnk7	assembly
Kif11	assembly
Klf9	assembly
Lgi1	assembly
Loxl4	assembly
Map4k2	assembly
Oga	assembly
Mms19	overlapping clones, direct sequencing
Mrpl11	assembly
Mrpl43	assembly
Ms4a10	assembly
Ms4a4b	assembly
Ms4a4d	assembly
Ms4a6b	assembly
Ms4a6c	assembly
Ms4a6d	assembly
Ms4a7	assembly
Ms4a8a	assembly
Mta2	assembly
Tesmin	assembly
Ndufv1	assembly
Nolc1	assembly
Nrxn2	assembly
Nxf1	assembly
Oosp1	assembly
Znhit2	assembly
Ovol1	assembly
Pank1	assembly
Pdlim1	assembly
Pga5	assembly
Pi4k2a	assembly
Pik3ap1	assembly
Pip5k1b	assembly
Plce1	assembly
Pnliprp2	assembly
Pola2	assembly
Poll	assembly
Polr2g	assembly
Ppp1r3c	assembly
Prkg1	assembly
Aldh18a1	assembly
Tmem132a	assembly
Rbm14	assembly
Rbm4	assembly
Rce1	assembly
Rcor2	assembly
Rfx3	assembly
Rcl1	assembly
Rpp30	assembly
Rps6ka4	assembly
Rps6kb2	assembly
Rtn3	assembly
Sart1	assembly
Scd3	assembly
Scyl1	assembly
Exoc6	assembly
Sfxn3	assembly
Shoc2	assembly
Slc1a1	assembly
Slc22a8	assembly
Slc29a2	assembly
Sorcs1	assembly
Znrd2	assembly
Stip1	assembly
Slk	assembly
Stx3	assembly
Stx5a	assembly
Syt12	assembly
Syt7	assembly
Cd248	assembly
Tjp2	assembly
Cemip2	assembly
Trpt1	assembly
Trim8	assembly
Atp5mk	assembly
Best1	assembly
Vti1a	assembly
Zfpl1	assembly
Aip	assembly
Cdc42ep2	assembly
Pcx	assembly
Slc22a6	assembly
Slc3a2	assembly
Coro1b	assembly
Prdx5	assembly
Ptprcap	assembly
Ehd1	assembly
Ltbp3	assembly
Pygm	assembly
Dpf2	assembly
Fam89b	assembly
Plcb3	assembly
Capn1	assembly
Chka	assembly
Esrra	assembly
Mrpl49	assembly
Ccs	assembly
Cst6	assembly
Gng3	assembly
Bscl2	assembly
Ms4a1	assembly
Cd5	assembly
Cd6	assembly
Ddb1	assembly
Prpf19	assembly
Tcirg1	assembly
Gna14	assembly
Ostf1	assembly
Zfand5	assembly
Gda	assembly
Gcnt1	assembly
Smarca2	assembly
Anxa1	assembly
Pcsk5	assembly
Pdcd4	assembly
Vldlr	assembly
Pum3	assembly
Fas	assembly
Ankrd22	assembly
Pten	assembly
Gldc	assembly
Ide	assembly
Papss2	assembly
Minpp1	assembly
Entpd1	assembly
Frat1	assembly
Rbp4	assembly
Dntt	assembly
R3hcc1l	assembly
Fbxw4	assembly
Scd1	assembly
Scd2	assembly
Wnt8b	assembly
Chuk	assembly
Pitx3	assembly
Add3	assembly
Elovl3	assembly
Sufu	assembly
Hhex	assembly
Ins1	assembly
Neurl1a	assembly
Mxi1	assembly
Adra2a	assembly
Casp7	assembly
Wbp1l	assembly
Prdx3	assembly
Adrb1	assembly
Gpam	assembly
Tectb	assembly
1700018L02Rik	assembly

Notes

• Reference
  The markers listed below for this experiment were mapped to mouse chromosomes based on sequence similarities to the Mouse Genome Sequencing Consortium (MGSC V3) assembly. Chromosomal locations were obtained from the Genome Exploration Research Group of the RIKEN Institute of Physical and Chemical Research in Japan. Where multiple RIKEN clones were associated to the same marker by sequence similarity clustering, mapping data were loaded only if all RIKEN clones from the same cluster mapped to the same mouse chromosome.