4930526L06Rik Gene Detail

Summary

• Symbol
  4930526L06Rik
• Name
  RIKEN cDNA 4930526L06 gene

• Feature Type
  lncRNA gene
• IDs
  MGI:1922388
  NCBI Gene: 75138
• Alliance
  genome feature page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr19:11174181-11277248 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, 8.01 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  2339 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1922388	lncRNA gene	Chr19:11174181-11277258 (+)
129S1/SvImJ	ENSMUSG00200052933	lncRNA gene	Chr19:7853296-7956942 (+)
A/J	ENSMUSG00195053918	lncRNA gene	Chr19:8064620-8161366 (+)
AKR/J	ENSMUSG00220051547	lncRNA gene	Chr19:7974205-8072008 (+)
BALB/cJ	ENSMUSG00180052061	lncRNA gene	Chr19:8428063-8525942 (+)
C3H/HeJ	ENSMUSG00175015622	lncRNA gene	Chr19:7699030-7802665 (+)
C57BL/6NJ	ENSMUSG00215048352	lncRNA gene	Chr19:7770616-7874267 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005045012	lncRNA gene	Chr19:7569544-7649063 (+)
CBA/J	ENSMUSG00210050556	lncRNA gene	Chr19:7897567-8001191 (+)
DBA/2J	ENSMUSG00185053561	lncRNA gene	Chr19:8307323-8410970 (+)
FVB/NJ	ENSMUSG00205053230	lncRNA gene	Chr19:7774893-7871996 (+)
JF1/MsJ	ENSUMUG00000056922	lncRNA gene	Chr19:8442343-8533021 (+)
LP/J	ENSMUSG00230054248	lncRNA gene	Chr19:9227904-9331549 (+)
NOD/ShiLtJ	ENSMUSG00190053098	lncRNA gene	Chr19:7525856-7624052 (+)
NZO/HlLtJ	ENSMUSG00225047140	lncRNA gene	Chr19:12936846-13040473 (+)
PWK/PhJ	ENSLUMG00010008938	lncRNA gene	Chr19:7840729-7938717 (+)
SPRET/EiJ	ENSMSPG00010051516	lncRNA gene	Chr19:7667752-7752473 (+)
WSB/EiJ	ENSIUOG00005051493	lncRNA gene	Chr19:7425780-7530995 (+)

Homology

• Gene Tree
  4930526L06Rik
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  3
• Endonuclease-mediated
  1
• Gene trapped
  2
• Genomic Mutations
  1 involving 4930526L06Rik
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• RefSeq
  1

• Ensembl
  ENSMUSG00000097091 (Evidence)
• NCBI Gene
  75138

Representative Sequences			Length	Strain/Species
genomic	75138	NCBI Gene Model | MGI Sequence Detail	103068	C57BL/6J
transcript	NR_045317	RefSeq | MGI Sequence Detail	1020	C57BL/6

Molecular
Reagents

• All nucleic 1

  cDNA 1

  
  

  Microarray probesets 2

References

• Summaries
  All 12

  Phenotypes 3
• Earliest
  J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
• Latest
  J:360865 Jiang HC, et al., CD20/MS4A1 is a mammalian olfactory receptor expressed in a subset of olfactory sensory neurons that mediates innate avoidance of predators. Nat Commun. 2024 Apr 18;15(1):3360

TSS for 4930526L06Rik:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr155156	Chr19:11269772-11269785 (+)	95,598 bp
Tssr155157	Chr19:11269787-11269801 (+)	95,613 bp