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Trpd52l3 Gene Detail
Summary
  • Symbol
    Trpd52l3
  • Name
    tumor protein D52-like 3
  • Synonyms
    4931412G03Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1913995
    NCBI Gene: 66745
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr19:29981190-29983418 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 19, 24.68 cM, cytoband C2
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    34 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1913995
 protein coding gene Chr19:29981190-29983420 (+)
129S1/SvImJ MGP_129S1SvImJ_G0025030
 protein coding gene Chr19:28492375-28494605 (+)
A/J MGP_AJ_G0025007
 protein coding gene Chr19:27076860-27079090 (+)
AKR/J MGP_AKRJ_G0024975
 protein coding gene Chr19:28038313-28040543 (+)
BALB/cJ MGP_BALBcJ_G0025006
 protein coding gene Chr19:27111670-27113900 (+)
C3H/HeJ MGP_C3HHeJ_G0024762
 protein coding gene Chr19:28005227-28007457 (+)
C57BL/6NJ MGP_C57BL6NJ_G0025447
 protein coding gene Chr19:29272064-29274294 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0022866
 protein coding gene Chr19:27047906-27050138 (+)
CAST/EiJ MGP_CASTEiJ_G0024232
 protein coding gene Chr19:27869490-27871717 (+)
CBA/J MGP_CBAJ_G0024740
 protein coding gene Chr19:30674252-30676482 (+)
DBA/2J MGP_DBA2J_G0024872
 protein coding gene Chr19:27012567-27014797 (+)
FVB/NJ MGP_FVBNJ_G0024834
 protein coding gene Chr19:26853724-26855954 (+)
LP/J MGP_LPJ_G0024957
 protein coding gene Chr19:28485442-28487672 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0024861
 protein coding gene Chr19:30561019-30563249 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0025502
 protein coding gene Chr19:28049159-28051389 (+)
PWK/PhJ MGP_PWKPhJ_G0023980
 protein coding gene Chr19:26683617-26685844 (+)
SPRET/EiJ MGP_SPRETEiJ_G0023784
 protein coding gene Chr19:27371438-27373669 (+)
WSB/EiJ MGP_WSBEiJ_G0024299
 protein coding gene Chr19:28098808-28101036 (+)



Homology
more
  • Human Ortholog
    TPD52L3, TPD52 like 3
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    TPD52L3, TPD52 like 3
  • Synonyms
    D55, hD55, NYDSP25, TPD55
  • Links
    NCBI Gene ID: 89882
    neXtProt AC: NX_Q96J77
    UniProt: Q96J77

  • Chr Location
    9p24.1; chr9:6328375-6331891 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    5 phenotype references
Male mice homozygous for a null allele exhibit normal fecundity.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    7
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000024815 Ensembl Gene Model | MGI Sequence Detail 2229 C57BL/6J ±  kb
transcript ENSMUST00000025727 Ensembl | MGI Sequence Detail 2229 Not Applicable  
polypeptide ENSMUSP00000025727 Ensembl | MGI Sequence Detail 231 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR007327 Tumour protein D52
Molecular
Reagents
less
  • All nucleic 7
    cDNA 7

    Microarray probesets 2
References
more
  • Summaries
    All 22
    Gene Ontology 1
    Phenotypes 5
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:279039 Lu Y, et al., CRISPR/Cas9-mediated genome editing reveals 30 testis-enriched genes dispensable for male fertility in mice. Biol Reprod. 2019 Aug 1;101(2):501-511
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory